RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.47	□□□□□ -0.25	2e-7	■■□□□ 11.4
SREBF1-222	ENST00000583732	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	GABRG1	Q8N1C3	465 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	FBXW5	Q969U6	566 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	CPNE4	Q96A23	557 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	MTERF3	Q96E29	417 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	STAC	Q99469	402 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	C1orf50	Q9BV19	199 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	PIGU	Q9H490	435 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	CXorf36	Q9H7Y0	433 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	COQ10B	Q9H8M1	238 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	TIGAR	Q9NQ88	270 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	DUSP22	Q9NRW4	184 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	KLHL13	Q9P2N7	655 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMED5	Q9Y3A6	229 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	USF3	Q68DE3	2245 aa		13.47	□□□□□ -0.25
SREBF1-222	ENST00000583732	CR1	P17927	2039 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	CHD3	Q12873	2000 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732		A0A1W2PNR3	127 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	GTPBP1	O00178	669 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	TRIM13	O60858	407 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	HSPA4L	O95757	839 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	SOD3	P08294	240 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	LAMP1	P11279	417 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	P2RX1	P51575	399 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	CCR4	P51679	360 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	KRTAP1-1	Q07627	177 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	FAP	Q12884	760 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	RNPS1	Q15287	305 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	NCMAP	Q5T1S8	102 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	SFRP5	Q5T4F7	317 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	MTERF4	Q7Z6M4	381 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	CNPY4	Q8N129	248 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF527	Q8NB42	609 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	KBTBD8	Q8NFY9	601 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	OR5AK3P	Q8NH89	298 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	KIF18A	Q8NI77	898 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ADAMTS15	Q8TE58	950 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZFP90	Q8TF47	636 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	GTPBP3	Q969Y2	492 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	MECR	Q9BV79	373 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ANKZF1	Q9H8Y5	726 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ATP6V1H	Q9UI12	483 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	FAF1	Q9UNN5	650 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	KCNE3	Q9Y6H6	103 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZAN	Q9Y493	2812 aa		13.46	□□□□□ -0.25
SREBF1-222	ENST00000583732	ROS1	P08922	2347 aa		13.46	□□□□□ -0.26
SREBF1-222	ENST00000583732	FREM1	Q5H8C1	2179 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	GJE1	A6NN92	205 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	TMEM114	B3SHH9	223 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732		C9JVG2	144 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732		H3BNH8	94 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	PEX11A	O75192	247 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	PRKD3	O94806	890 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	C6orf47	O95873	294 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	DDX5	P17844	614 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ENPP1	P22413	925 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLC7A1	P30825	629 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	SOAT1	P35610	550 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	CCT3	P49368	545 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	PTGR1	Q14914	329 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	MLC1	Q15049	377 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	STK11	Q15831	433 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ADAM5	Q6NVV9	412 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	RNF165	Q6ZSG1	346 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	GPR119	Q8TDV5	335 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	KISS1R	Q969F8	398 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF775	Q96BV0	537 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	TRMO	Q9BU70	441 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ACTRT3	Q9BYD9	372 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ESRP2	Q9H6T0	727 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	PRSS50	Q9UI38	385 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	ICAM5	Q9UMF0	924 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	TRAF6	Q9Y4K3	522 aa		13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732	GPC6	Q9Y625	555 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-222	ENST00000583732		A0A1W2PP18	115 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	KIF2A	O00139	706 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	CFLAR	O15519	480 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	TMCC2	O75069	709 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	SKAP2	O75563	359 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	CYP7B1	O75881	506 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	LYZL6	O75951	148 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	YES1	P07947	543 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	PRKCA	P17252	672 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	MAPK1	P28482	360 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	ALDH3A1	P30838	453 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	RPL3	P39023	403 aa	Known RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	BSPH1	Q075Z2	132 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	DMTN	Q08495	405 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	SELENBP1	Q13228	472 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	KLHL26	Q53HC5	615 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	ARL13A	Q5H913	290 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZCCHC23	Q6ZST2	131 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	OLIG3	Q7RTU3	272 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	TDRP	Q86YL5	185 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	KRTCAP2	Q8N6L1	136 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms