RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	UGT3A2	Q3SY77	523 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	POM121L1P	Q3SYA9	428 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ZNF658B	Q4V348	819 aa	Predicted RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	LACTB2	Q53H82	288 aa	Predicted RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SPANXN3	Q5MJ09	141 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	GPRC6A	Q5T6X5	926 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ANKRD22	Q5VYY1	191 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	RAET1G	Q6H3X3	334 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ARHGAP11A	Q6P4F7	1023 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	CYB5D1	Q6P9G0	228 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	BTNL8	Q6UX41	500 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	WASH2P	Q6VEQ5	465 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453		Q6ZSR6	202 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	CENPU	Q71F23	418 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ASCL5	Q7RTU5	278 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ARHGAP22	Q7Z5H3	698 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	NRARP	Q7Z6K4	114 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	C17orf82	Q86X59	251 aa	Predicted RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	NUDT13	Q86X67	352 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	KLHL7	Q8IXQ5	586 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	IFT20	Q8IY31	132 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SLC22A18AS	Q8N1D0	253 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ZNF619	Q8N2I2	560 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SFRP1	Q8N474	314 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	RASGEF1A	Q8N9B8	481 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	THAP8	Q8NA92	274 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	NOA1	Q8NC60	698 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	GPR26	Q8NDV2	337 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	OR4K2	Q8NGD2	314 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	OR6C4	Q8NGE1	309 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	OR56A4	Q8NGH8	313 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	OR4L1	Q8NH43	312 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	PSMA8	Q8TAA3	256 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	BLOC1S5	Q8TDH9	187 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SAP25	Q8TEE9	199 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	2.8	□□□□□ -1.96	2e-6	■■■■■ 40.5
MSI2-215	ENST00000582453	CDKN2AIPNL	Q96HQ2	116 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	DNAJC1	Q96KC8	554 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	PKNOX2	Q96KN3	472 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SGK494	Q96LW2	274 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	COPS8	Q99627	209 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	EBNA1BP2	Q99848	306 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	WRAP53	Q9BUR4	548 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	RIOK2	Q9BVS4	552 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	ACAT2	Q9BWD1	397 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	VPS37B	Q9H9H4	285 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	UCK1	Q9HA47	277 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	TMEM9B	Q9NQ34	198 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	INTS10	Q9NVR2	710 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	SPAST	Q9UBP0	616 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	MTRF1L	Q9UGC7	380 aa	Known RBP	2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	FETUB	Q9UGM5	382 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	GPR132	Q9UNW8	380 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	TEX264	Q9Y6I9	313 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	OTOGL	Q3ZCN5	2332 aa		2.8	□□□□□ -1.96
MSI2-215	ENST00000582453	CCDC162P	A2VCL2	907 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	FAM47DP	A6NHR8	397 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	FAM159B	A6NKW6	160 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	OR5K4	A6NMS3	321 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453		E9PI62	339 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PLOD2	O00469	737 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CDX4	O14627	284 aa	Predicted RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PRMT5	O14744	637 aa	Predicted RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	KMO	O15229	486 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	KERA	O60938	352 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	SLC25A14	O95258	325 aa	Predicted RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PNP	P00491	289 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	GOT2	P00505	430 aa	Known RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	TNF	P01375	233 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	C1QA	P02745	245 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	FTH1	P02794	183 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PCCB	P05166	539 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	GP1BA	P07359	652 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PIRT	P0C851	137 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	GIMD1	P0DJR0	217 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	ALPPL2	P10696	532 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	LIF	P15018	202 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	ZNF7	P17097	686 aa	Predicted RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CKMT2	P17540	419 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	VCL	P18206	1134 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CHRNB4	P30926	498 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	MAT2A	P31153	395 aa	Known RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	SOAT1	P35610	550 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	LEPR	P48357	1165 aa	Known RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CD151	P48509	253 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CSNK1E	P49674	416 aa	Known RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	ATXN3	P54252	364 aa	Predicted RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PLTP	P55058	493 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	B3GALT5-AS1	P59052	145 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	SRP54	P61011	504 aa	Known RBP	2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	IRX4	P78413	519 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CX3CL1	P78423	397 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	C2orf54	Q08AI8	447 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	POU6F1	Q14863	301 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	ELOC	Q15369	112 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	CHRNA6	Q15825	494 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	HLA-B	Q31612	363 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	AARD	Q4LEZ3	155 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	PYCR3	Q53H96	274 aa		2.79	□□□□□ -1.96
MSI2-215	ENST00000582453	FASTKD1	Q53R41	847 aa	Known RBP	2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms