RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MXD4Q14582 209 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 SYPL1Q16563 259 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 SBK1Q52WX2 424 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF584Q8IVC4 421 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 UBQLNLQ8IYU4 475 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 IPMKQ8NFU5 416 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 OR2A12Q8NGT7 310 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 HAVCR1Q96D42 359 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 MS4A14Q96JA4 679 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 RIT2Q99578 217 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 CITED1Q99966 193 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 MAPKAP1Q9BPZ7 522 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 ALG12Q9BV10 488 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 SLITRK2Q9H156 845 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 NXF5Q9H1B4 397 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 OR1A1Q9P1Q5 309 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 WRAP73Q9P2S5 460 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 MAB21L2Q9Y586 359 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 ALG6Q9Y672 507 aa3.42□□□□□ -1.86
SMCHD1-205ENST00000581383 LRRK1Q38SD2 2015 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 A8MU10 97 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 H0YCG3 227 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 K7EQM0 130 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 WWP2O00308 870 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 TNFSF11O14788 317 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CPLX1O14810 134 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ADCY5O95622 1261 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 IQCF3P0C7M6 154 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 P0C879 139 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 PRG2P13727 222 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ZBTB25P24278 435 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 EPHX2P34913 555 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CBX1P83916 185 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 PRR4Q16378 134 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 RNF212Q495C1 297 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 WSCD1Q658N2 575 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 FRA10AC1Q70Z53 315 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 MOB1BQ7L9L4 216 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 C11orf42Q8N5U0 333 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 STXBP6Q8NFX7 210 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 FAM3CQ92520 227 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CELF6Q96J87 481 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 SENP8Q96LD8 212 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF607Q96SK3 696 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 C19orf24Q9BVV8 132 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CHIAQ9BZP6 476 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 GLIPR2Q9H4G4 154 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF702PQ9H963 129 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 FANCFQ9NPI8 374 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 LCMT1Q9UIC8 334 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF221Q9UK13 617 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 ANGPTL2Q9UKU9 493 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 PDE10AQ9Y233 779 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 CA5BQ9Y2D0 317 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 KIF16BQ96L93 1317 aa3.41□□□□□ -1.86
SMCHD1-205ENST00000581383 B4DXG7 233 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 G3V4G9 280 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 MSH4O15457 936 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 GMFGO60234 142 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 LRATO95237 230 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 STSP08842 583 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 HNF1AP20823 631 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 ZP3P21754 424 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 GCKP35557 465 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 EFNA3P52797 238 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 CSTF1Q05048 431 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 ANKDD1AQ495B1 522 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 PRR30Q53SZ7 412 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 OR2B11Q5JQS5 317 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 FAM199XQ6PEV8 388 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 CXCL17Q6UXB2 119 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 C16orf62Q7Z3J2 963 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 MTURNQ8N3F0 131 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 KIR3DL3Q8N743 410 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 OR51G2Q8NGK0 314 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 OR5L2Q8NGL0 311 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 OR2T3Q8NH03 318 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 TRIM44Q96DX7 344 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 AMDHD1Q96NU7 426 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 OMDQ99983 421 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 EDEM2Q9BV94 578 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 Q9H3A6 140 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 AIPL1Q9NZN9 384 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 RNF14Q9UBS8 474 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 MRPS33Q9Y291 106 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF318Q5VUA4 2279 aa3.4□□□□□ -1.87
SMCHD1-205ENST00000581383 SMIM28A0A1B0GU29 152 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 PP2D1A8MPX8 630 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF705EA8MWA4 302 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 SERF1AO75920 110 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ALOX5P09917 674 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms