RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 ICAM5Q9UMF0 924 aa13.97□□□□□ -0.17
SS18-215ENST00000580642 TESMINQ9Y4I5 508 aa13.97□□□□□ -0.17
SS18-215ENST00000580642 WDFY3Q8IZQ1 3526 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 ARGFXA6NJG6 315 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 EFSO43281 561 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 HCRTR2O43614 444 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 CHP2O43745 196 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 PNMTP11086 282 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 ANXA8P13928 327 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 ZNF26P17031 533 aaPredicted RBP13.96□□□□□ -0.17
SS18-215ENST00000580642 WT1P19544 449 aaPredicted RBP13.96□□□□□ -0.17
SS18-215ENST00000580642 SPINK2P20155 84 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 EIF2S3P41091 472 aaKnown RBP13.96□□□□□ -0.17
SS18-215ENST00000580642 RBM34P42696 430 aaKnown RBP13.96□□□□□ -0.17
SS18-215ENST00000580642 HSPA13P48723 471 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 MAP2K6P52564 334 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 UCNP55089 124 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 OR1Q1Q15612 314 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 RFX4Q33E94 735 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 IL20RBQ6UXL0 311 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 TMEM234Q8WY98 164 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 SLC41A3Q96GZ6 507 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 ALPK1Q96QP1 1244 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 CIB1Q99828 191 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 WFDC6Q9BQY6 131 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 FUZQ9BT04 418 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 OSBPL11Q9BXB4 747 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 KRCC1Q9NPI7 259 aaPredicted RBP13.96□□□□□ -0.17
SS18-215ENST00000580642 TIMMDC1Q9NPL8 285 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 WIF1Q9Y5W5 379 aa13.96□□□□□ -0.17
SS18-215ENST00000580642 A0A0B4J2E0 115 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 A0A1B0GX12 115 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 ANKUB1A6NFN9 424 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 J3KTA2 159 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 ETV2O00321 342 aaPredicted RBP13.95□□□□□ -0.18
SS18-215ENST00000580642 FRS3O43559 492 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 CEACAM4O75871 244 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 DIRAS1O95057 198 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 CCNB2O95067 398 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 IGF2P01344 180 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 P04436 131 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 GKN3PP0CG01 181 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 PRG2P13727 222 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 PTGDSP41222 190 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 SLC1A3P43003 542 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 HTR3AP46098 478 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 YAP1P46937 504 aaKnown RBP13.95□□□□□ -0.18
SS18-215ENST00000580642 ALDH3A2P51648 485 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 PPP2R2BQ00005 443 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 ZNF117Q03924 483 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 MFAP5Q13361 173 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 DAG1Q14118 895 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 BROXQ5VW32 411 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 LPCAT4Q643R3 524 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 FCRLBQ6BAA4 426 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 STK32CQ86UX6 486 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 EPHX4Q8IUS5 362 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 BEST3Q8N1M1 668 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 AMER2Q8N7J2 671 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 GIPC3Q8TF64 312 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 ACOT11Q8WXI4 607 aaPredicted RBP13.95□□□□□ -0.18
SS18-215ENST00000580642 ST8SIA1Q92185 356 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 HAS2Q92819 552 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 TMEM41AQ96HV5 264 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 SLC19A3Q9BZV2 496 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 COQ10BQ9H8M1 238 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 SACM1LQ9NTJ5 587 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 RPS6KB2Q9UBS0 482 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 ENOPH1Q9UHY7 261 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 CFAP54Q96N23 3096 aa13.95□□□□□ -0.18
SS18-215ENST00000580642 A0A087WZY1 265 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 SH3PXD2BA1X283 911 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 SAC3D1A6NKF1 404 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 CPSF4LA6NMK7 179 aaKnown RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 MAN1A2O60476 641 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 CDC40O60508 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
SS18-215ENST00000580642 BCAS1O75363 584 aaPredicted RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 ALPLP05186 524 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 PRKAR1AP10644 381 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 ELAVL4P26378 380 aaKnown RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 HTR2AP28223 471 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 GANABQ14697 944 aaKnown RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 B3GNTL1Q67FW5 361 aaPredicted RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 DESI1Q6ICB0 168 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 FAHD1Q6P587 224 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 IGFL2Q6UWQ7 119 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 GDF7Q7Z4P5 450 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 PACS2Q86VP3 889 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 FADS6Q8N9I5 356 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 OR5M3Q8NGP4 307 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 SLC7A13Q8TCU3 470 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 PCSK5Q92824 1860 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 GATA6Q92908 595 aa13.94□□□□□ -0.18
SS18-215ENST00000580642 NAF1Q96HR8 494 aaKnown RBP13.94□□□□□ -0.18
SS18-215ENST00000580642 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms