RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 PIK3R1P27986 724 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SUCLG1P53597 346 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GAS1P54826 345 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TPD52P55327 224 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CLDN20P56880 219 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RAE1P78406 368 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MRPS22P82650 360 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MAP4K2Q12851 820 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RAB35Q15286 201 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NNATQ16517 81 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CR1LQ2VPA4 569 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CTU2Q2VPK5 515 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GLYR1Q49A26 553 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SPDYAQ5MJ70 313 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CGB2Q6NT52 195 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 COMMD6Q7Z4G1 85 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 LRRC34Q8IZ02 419 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GABRG1Q8N1C3 465 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 METTL4Q8N3J2 472 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C1orf52Q8N6N3 182 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 BTBD9Q96Q07 612 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CBLN4Q9NTU7 201 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 STOML1Q9UBI4 398 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 VPS29Q9UBQ0 182 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRODH2Q9UF12 536 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF639Q9UID6 485 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 WBP11Q9Y2W2 641 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF337Q9Y3M9 751 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 POLR3HQ9Y535 204 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 USH1CQ9Y6N9 552 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NOTCH3Q9UM47 2321 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TMEM89A2RUT3 159 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DPRXA6NFQ7 191 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 WASHC1A8K0Z3 465 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FAM157AC9JC47 383 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NPIPB8E9PQR5 432 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 HDAC3O15379 428 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RGS14O43566 566 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PCDH7O60245 1069 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TSPAN2O60636 221 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PEX11AO75192 247 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KLK1P06870 262 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 VIMP08670 466 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PORP16435 677 aaPredicted RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 HK1P19367 917 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NT5EP21589 574 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRPH2P23942 346 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EPHA3P29320 983 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 AGTR1P30556 359 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TIA1P31483 386 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TTKP33981 857 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SLC6A8P48029 635 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EFNA4P52798 201 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RPL38P63173 70 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GNGT1P63211 74 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ACSM2AQ08AH3 577 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SF3A3Q12874 501 aaKnown RBP eCLIP6.36□□□□□ -1.393e-6■■■□□ 16.5
CDK5RAP3-209ENST00000578663 KIAA0040Q15053 153 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 P2RY6Q15077 328 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SGCBQ16585 318 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TMEM44Q2T9K0 475 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRICKLE4Q2TBC4 344 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GALNTL6Q49A17 601 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SLC9B1Q4ZJI4 515 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ACSM2BQ68CK6 577 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CYP20A1Q6UW02 462 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DEF8Q6ZN54 512 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GGNQ86UU5 652 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NUDT13Q86X67 352 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KIRREL3Q8IZU9 778 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR2M3Q8NG83 312 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR4K14Q8NGD5 310 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RFWD2Q8NHY2 731 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KISS1RQ969F8 398 aaPredicted RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TMBIM1Q969X1 311 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FCRL1Q96LA6 429 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF317Q96PQ6 595 aaPredicted RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR52B2Q96RD2 323 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRR14Q9BWN1 585 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRRG4Q9BZD6 226 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 WDR55Q9H6Y2 383 aaPredicted RBP6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PTGES2Q9H7Z7 377 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 AKTIPQ9H8T0 292 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MEAF6Q9HAF1 191 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GP6Q9HCN6 339 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FGFR1OP2Q9NVK5 253 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NMRK1Q9NWW6 199 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C1orf109Q9NX04 203 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MAT2BQ9NZL9 334 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EHD3Q9NZN3 535 aa6.36□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PPP4R1LQ9P1A2 415 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms