RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TMEM44Q2T9K0 475 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 LINC00303Q3SY05 128 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 FAM26DQ5JW98 314 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 MORN1Q5T089 497 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ZNF697Q5TEC3 545 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 ZDHHC20Q5W0Z9 365 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 C18orf63Q68DL7 685 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 PXKQ7Z7A4 578 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 VRK2Q86Y07 508 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 OR2T33Q8NG76 320 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 GHSRQ92847 366 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 ARMC5Q96C12 935 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 NARS2Q96I59 477 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 NRTNQ99748 197 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 GINS4Q9BRT9 223 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 NDC1Q9BTX1 674 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 NKX6-2Q9C056 277 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ESRP2Q9H6T0 727 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ACTR10Q9NZ32 417 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 MLXQ9UH92 298 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 CYB5R1Q9UHQ9 305 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 KCNE3Q9Y6H6 103 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 SLC5A10A0PJK1 596 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ANTXRLA6NF34 631 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 MAGEB4O15481 346 aaPredicted RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 MT-ND5P03915 603 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 UCHL1P09936 223 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 FNTBP49356 437 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 MC2RQ01718 297 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 FAM69AQ5T7M9 428 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ZNF620Q6ZNG0 422 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 CDH26Q8IXH8 852 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 BOLLQ8N9W6 283 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 OR5M9Q8NGP3 310 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 TMEM255BQ8WV15 326 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 KAT2AQ92830 837 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 IL17FQ96PD4 163 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 DERL3Q96Q80 235 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 TMPRSS13Q9BYE2 586 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ELAC1Q9H777 363 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 MED11Q9P086 117 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ERVK-19Q9WJR5 959 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 NPFFR2Q9Y5X5 522 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 H7C2Y5 167 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 OR2A4O95047 310 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 EGFP01133 1207 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 MST1P26927 711 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 PYCR1P32322 319 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 H2BFSP57053 126 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 FAM74A1Q5RGS3 127 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 HEPHL1Q6MZM0 1159 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 NIPAL3Q6P499 406 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 TMEM220Q6QAJ8 160 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ASPGQ86U10 573 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 MCATQ8IVS2 390 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 EIF4E3Q8N5X7 224 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 THEM6Q8WUY1 208 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 OR2A7Q96R45 310 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 OR51V1Q9H2C8 321 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
SMG6-215ENST00000574501 PLAGL1Q9UM63 463 aa13.4□□□□□ -0.26
SMG6-215ENST00000574501 F8W036 122 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 SC5DO75845 299 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
SMG6-215ENST00000574501 CPN1P15169 458 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 STAT5AP42229 794 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 LGALS3BPQ08380 585 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ELP2Q6IA86 826 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 FUT10Q6P4F1 479 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 MEPCEQ7L2J0 689 aaKnown RBP13.39□□□□□ -0.27
SMG6-215ENST00000574501 C11orf96Q7Z7L8 435 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 CFAP206Q8IYR0 622 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 OR6V1Q8N148 313 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 FANK1Q8TC84 345 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 LINC01599Q8WXQ3 324 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 WDR34Q96EX3 536 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 JAM3Q9BX67 310 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ENKD1Q9H0I2 346 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 UBQLN3Q9H347 655 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 MARCH5Q9NX47 278 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 MPTX1A8MV57 137 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 FLRT2O43155 660 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
SMG6-215ENST00000574501 SERPIND1P05546 499 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms