RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SLC22A25Q6T423 547 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 Q6ZSR9 355 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 MUC15Q8N387 334 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 NUP43Q8NFH3 380 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 FAM110BQ8TC76 370 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 DCAKDQ8WVC6 231 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 GIMAP5Q96F15 307 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 EGLN2Q96KS0 407 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 CDC42EP4Q9H3Q1 356 aaKnown RBP17.53■□□□□ 0.4
CCDC40-206ENST00000572083 L2HGDHQ9H9P8 463 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 BCO1Q9HAY6 547 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 TMEM216Q9P0N5 145 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 KLHL9Q9P2J3 617 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 A0A1W2PNR3 127 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 A0A1W2PQD3 144 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 SERTM1A2A2V5 107 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 CCDC151A5D8V7 595 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 GJE1A6NN92 205 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 ZNF195O14628 629 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 OIP5O43482 229 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 GGT1P19440 569 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 COX5AP20674 150 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 IMPDH1P20839 514 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 IGHV1-2P23083 117 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 THBS2P35442 1172 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 TOMM34Q15785 309 aaPredicted RBP17.52■□□□□ 0.4
CCDC40-206ENST00000572083 CBLN3Q6UW01 205 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 B3GLCTQ6Y288 498 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 FBXL14Q8N1E6 418 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 SLC43A2Q8N370 569 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 COX18Q8N8Q8 333 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 OR6Y1Q8NGX8 325 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 PHOSPHO1Q8TCT1 267 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 C10orf105Q8TEF2 133 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 MS4A4EQ96PG1 132 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 ZNF300Q96RE9 604 aaPredicted RBP17.52■□□□□ 0.4
CCDC40-206ENST00000572083 DHRS9Q9BPW9 319 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 FUT8Q9BYC5 575 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 STK38LQ9Y2H1 464 aa17.52■□□□□ 0.4
CCDC40-206ENST00000572083 GOLGA8QA0A0J9YX86 632 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 SLC35F4A4IF30 521 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 GOLGA8OA6NCC3 632 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 GOLGA8NF8WBI6 632 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 GOLGA8RI6L899 631 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 LY6HO94772 140 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 MALRD1Q5VYJ5 2156 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 NOXRED1Q6NXP6 359 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 TMEM108Q6UXF1 575 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 CEP70Q8NHQ1 597 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 JADE3Q92613 823 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 C16orf58Q96GQ5 468 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 RADILQ96JH8 1075 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 MID1IP1Q9NPA3 183 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 KCNS2Q9ULS6 477 aa17.51■□□□□ 0.39
CCDC40-206ENST00000572083 NPIPA5A0A0B4J1W7 369 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 OR5H1A6NKK0 313 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 NPIPA7E9PJI5 369 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 KIF2AO00139 706 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 RGS14O43566 566 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 RAD51DO75771 328 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 NPIPA8P0DM63 369 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 USF1P22415 310 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 ATP5F1P24539 256 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 SLC7A1P30825 629 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 FABP6P51161 128 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF83P51522 516 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 LSM11P83369 360 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 RASGEF1BQ0VAM2 473 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 FAM120AOSQ5T036 256 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 FAM166AQ6J272 317 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 OR52N5Q8NH56 324 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 GSTO2Q9H4Y5 243 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 GIN1Q9NXP7 522 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 CARD8Q9Y2G2 431 aa17.5■□□□□ 0.39
CCDC40-206ENST00000572083 WBP11Q9Y2W2 641 aaKnown RBP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 GPC6Q9Y625 555 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-206ENST00000572083 A0A1W2PR80 420 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 H7C417 338 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 SMAD9O15198 467 aaKnown RBP17.49■□□□□ 0.39
CCDC40-206ENST00000572083 PGM3O95394 542 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 ALOX5P09917 674 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 DHRS4L1P0CG22 281 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 SERPINB4P48594 390 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 PRKAA2P54646 552 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 CHRNEQ04844 493 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 NDUFAF6Q330K2 333 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 P2RY8Q86VZ1 359 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 SLC22A9Q8IVM8 553 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF100Q8IYN0 542 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF433Q8N7K0 673 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-206ENST00000572083 FAM76AQ8TAV0 307 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 PROX1Q92786 737 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF524Q96C55 264 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 L3HYPDHQ96EM0 354 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 CHMP6Q96FZ7 201 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 NTMQ9P121 344 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF180Q9UJW8 692 aa17.49■□□□□ 0.39
CCDC40-206ENST00000572083 MGAT4BQ9UQ53 548 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms