RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PRF1P14222 555 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 SRD5A2P31213 254 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 DSTNP60981 165 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 DMTNQ08495 405 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 RBBP4Q09028 425 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
COMMD4-225ENST00000569245 ADRM1Q16186 407 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 CYP51A1Q16850 503 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-225ENST00000569245 DCST1Q5T197 706 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 RIPPLY2Q5TAB7 128 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 CDC73Q6P1J9 531 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 FIGNL1Q6PIW4 674 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 MEX3BQ6ZN04 569 aaKnown RBP13.13□□□□□ -0.31
COMMD4-225ENST00000569245 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 MICU2Q8IYU8 434 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 COX18Q8N8Q8 333 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 FAM156AQ8NDB6 213 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 DUSP19Q8WTR2 217 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 SFXN2Q96NB2 322 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 SERHL2Q9H4I8 314 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 TMEM38AQ9H6F2 299 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 MED11Q9P086 117 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 FAF1Q9UNN5 650 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-225ENST00000569245 POMPQ9Y244 141 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 ELOVL7A1L3X0 281 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 HSPB2A8KAH6 182 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 C17orf51A8MQB3 221 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 HMGN4O00479 90 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 ACOT8O14734 319 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 GMFGO60234 142 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 TOXO94900 526 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 EPPINO95925 133 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 IL2RAP01589 272 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 NUDT7P0C024 238 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 ACP2P11117 423 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 HPGDP15428 266 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-225ENST00000569245 MAP3K8P41279 467 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 KHKP50053 298 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 CASP9P55211 416 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 DSCR4P56555 118 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-225ENST00000569245 RPS26P62854 115 aaKnown RBP13.12□□□□□ -0.31
COMMD4-225ENST00000569245 MS4A2Q01362 244 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 VEZF1Q14119 521 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 HSPB2Q16082 182 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 DUSP5Q16690 384 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 VMACQ2NL98 169 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 GRAMD1BQ3KR37 738 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 LACC1Q8IV20 430 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 METTL25Q8N6Q8 603 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 CCDC124Q96CT7 223 aaKnown RBP13.12□□□□□ -0.31
COMMD4-225ENST00000569245 STACQ99469 402 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 OR51I1Q9H343 314 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 PIF1Q9H611 641 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 USP22Q9UPT9 525 aa13.12□□□□□ -0.31
COMMD4-225ENST00000569245 RRP15Q9Y3B9 282 aaKnown RBP13.12□□□□□ -0.31
COMMD4-225ENST00000569245 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-225ENST00000569245 ZIC3O60481 467 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 KCNK2O95069 426 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 ANGPTL1O95841 491 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 AGR2O95994 175 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 ARAFP10398 606 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 HK1P19367 917 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 GGT1P19440 569 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 PCGF2P35227 344 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-225ENST00000569245 STARP49675 285 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-225ENST00000569245 C17orf67Q0P5P2 114 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 TNFAIP8L2Q6P589 184 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-225ENST00000569245 SEM1Q6ZVN7 128 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 SLC30A8Q8IWU4 369 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 OR52E4Q8NGH9 312 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 ADAMTS15Q8TE58 950 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 CDS1Q92903 461 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 OR7D2Q96RA2 312 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 BTBD2Q9BX70 525 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 RTN4RQ9BZR6 473 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 PCDHAC1Q9H158 963 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 A4GALTQ9NPC4 353 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 ACTR3BQ9P1U1 418 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms