RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 GGT1P19440 569 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 HTR1EP28566 365 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 ADH7P40394 386 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 MAGEA5P43359 124 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 SUMO3P55854 103 aaPredicted RBP10.44□□□□□ -0.74
KARS-207ENST00000566560 NCALDP61601 193 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 EEF1A1P68104 462 aaKnown RBP10.44□□□□□ -0.74
KARS-207ENST00000566560 KCNJ10P78508 379 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 PLAURQ03405 335 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 DMTNQ08495 405 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 BNIP2Q12982 314 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 SKP2Q13309 424 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 TOMM20Q15388 145 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 HYAL4Q2M3T9 481 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
KARS-207ENST00000566560 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 DHRS4L2Q6PKH6 230 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 CBLN3Q6UW01 205 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 PRICKLE2Q7Z3G6 844 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 CISD2Q8N5K1 135 aaKnown RBP10.44□□□□□ -0.74
KARS-207ENST00000566560 SMYD1Q8NB12 490 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 OR2M3Q8NG83 312 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 B4GALNT2Q8NHY0 566 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 FAM162AQ96A26 154 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 MCUR1Q96AQ8 359 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 TAMM41Q96BW9 452 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 CCDC124Q96CT7 223 aaKnown RBP10.44□□□□□ -0.74
KARS-207ENST00000566560 GNRHR2Q96P88 292 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 LRMDAQ9H2I8 198 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 UBQLN3Q9H347 655 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 DSN1Q9H410 356 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 ARMC7Q9H6L4 198 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 PTGES2Q9H7Z7 377 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 OLAHQ9NV23 265 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 DNAJB12Q9NXW2 375 aaKnown RBP10.44□□□□□ -0.74
KARS-207ENST00000566560 MED11Q9P086 117 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 CD300AQ9UGN4 299 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 EGFL7Q9UHF1 273 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 MAGEL2Q9UJ55 1249 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 SLC13A4Q9UKG4 626 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 ZNF232Q9UNY5 417 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 NTNG1Q9Y2I2 539 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 SNX13Q9Y5W8 968 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 BSNQ9UPA5 3926 aa10.44□□□□□ -0.74
KARS-207ENST00000566560 DNAJC13O75165 2243 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 PCNX3Q9H6A9 2034 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 NBEAQ8NFP9 2946 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CDHR4A6H8M9 788 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ANKUB1A6NFN9 424 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 EIF4E1BA6NMX2 242 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 FAM47E-STBD1D6RA91 191 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ARPC2O15144 300 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CBR3O75828 277 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 DNAJC8O75937 253 aaPredicted RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 NUDT14O95848 222 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 IFNA14P01570 189 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 PRB1P04280 392 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 TCEA1P23193 301 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 DPP4P27487 766 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 MSX1P28360 303 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 SRD5A2P31213 254 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 P2RX1P51575 399 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ZNF41P51814 821 aaPredicted RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 CRYBA2P53672 197 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CBFBQ13951 182 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 GANABQ14697 944 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 FXNQ16595 210 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ZSWIM7Q19AV6 140 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 SIAH3Q8IW03 269 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 BHLHE22Q8NFJ8 381 aaPredicted RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 TOR1AIP2Q8NFQ8 470 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 RASSF5Q8WWW0 418 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 NR4A3Q92570 626 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CNOT9Q92600 299 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 SNRNP40Q96DI7 357 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 ARSGQ96EG1 525 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 C1GALT1C1Q96EU7 318 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CLPTM1LQ96KA5 538 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 PINK1Q9BXM7 581 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 LAT2Q9GZY6 243 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 MUC13Q9H3R2 512 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ZDHHC11Q9H8X9 412 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 EXOSC3Q9NQT5 275 aaKnown RBP10.43□□□□□ -0.74
KARS-207ENST00000566560 AGPAT4Q9NRZ5 378 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 RLIMQ9NVW2 624 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 QPCTLQ9NXS2 382 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 ICAM5Q9UMF0 924 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CHST2Q9Y4C5 530 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 SHANK1Q9Y566 2161 aa10.43□□□□□ -0.74
KARS-207ENST00000566560 CHD6Q8TD26 2715 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 NPIPA5E9PKD4 350 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 SYT5O00445 386 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 FRS3O43559 492 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 CDC40O60508 579 aaKnown RBP eCLIP10.42□□□□□ -0.74
KARS-207ENST00000566560 TRAPPC6AO75865 159 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 ZNF682O95780 498 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 SERPINA1P01009 418 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 CELA3AP09093 270 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 UQCRBP14927 111 aa10.42□□□□□ -0.74
KARS-207ENST00000566560 CD247P20963 164 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms