RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 A6NDX4 124 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 WISP3O95389 354 aaPredicted RBP2.79□□□□□ -1.96
UBR1-205ENST00000564540 ANXA3P12429 323 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 H2AFXP16104 143 aaPredicted RBP2.79□□□□□ -1.96
UBR1-205ENST00000564540 RCC1P18754 421 aaPredicted RBP2.79□□□□□ -1.96
UBR1-205ENST00000564540 IL10P22301 178 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 RABIFP47224 123 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 KLHL30Q0D2K2 578 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 EXOSC2Q13868 293 aaKnown RBP2.79□□□□□ -1.96
UBR1-205ENST00000564540 TAF7Q15545 349 aaPredicted RBP2.79□□□□□ -1.96
UBR1-205ENST00000564540 TOR1AIP1Q5JTV8 583 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 PAGE3Q5JUK9 113 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 SCYL2Q6P3W7 929 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 HDDC3Q8N4P3 179 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 CERS5Q8N5B7 392 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 Q8N9W7 124 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 IPMKQ8NFU5 416 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 M1APQ8TC57 530 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 BLOC1S5Q8TDH9 187 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 OR1E3Q8WZA6 343 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 KRT23Q9C075 422 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 HSD3B7Q9H2F3 369 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 ACTR3BQ9P1U1 418 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 ZNF225Q9UK10 706 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 PSG11Q9UQ72 335 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 NUDCQ9Y266 331 aa2.79□□□□□ -1.96
UBR1-205ENST00000564540 RNF103-CHMP3A0A140T963 221 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 ARHGAP42A6NI28 874 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 SLC9B1P1A6NJY1 282 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 LRRC30A6NM36 301 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 WASHC1A8K0Z3 465 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 A8MUA0 341 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 K7EPI3 171 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 LGALS8O00214 317 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 HMMRO75330 724 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 STX11O75558 287 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 THRBP10828 461 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 RALAP11233 206 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 ATP5A1P25705 553 aaKnown RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 CAMLGP49069 296 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 HTD2P86397 168 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 SYPL1Q16563 259 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 KCTD19Q17RG1 926 aaPredicted RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 ATF7IP2Q5U623 682 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 TMEM184AQ6ZMB5 413 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 LRRC70Q7Z2Q7 622 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 ZNF561Q8N587 486 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 FAM71E2Q8N5Q1 922 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 MRPL43Q8N983 215 aaKnown RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 STKLD1Q8NE28 680 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 KIR2DL5BQ8NHK3 375 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 DQX1Q8TE96 717 aaKnown RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 SLC13A3Q8WWT9 602 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 IL1F10Q8WWZ1 152 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 NCLNQ969V3 563 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 C16orf45Q96MC5 204 aaPredicted RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 CYP2S1Q96SQ9 504 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 MCHR1Q99705 422 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 SRXN1Q9BYN0 137 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 PPDPFQ9H3Y8 114 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 NTN4Q9HB63 628 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 TAS2R3Q9NYW6 316 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 CRLS1Q9UJA2 301 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 HOOK1Q9UJC3 728 aaKnown RBP2.78□□□□□ -1.96
UBR1-205ENST00000564540 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
UBR1-205ENST00000564540 CFAP73A6NFT4 308 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 FAM74A7A6NL05 159 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 FCN1O00602 326 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 NDC80O14777 642 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 SMPD2O60906 423 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ZNF324O75467 553 aaPredicted RBP2.77□□□□□ -1.97
UBR1-205ENST00000564540 MMP1P03956 469 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ALPPP05187 535 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ALPPL2P10696 532 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 SFNP31947 248 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 EPHX2P34913 555 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ATXN3P54252 364 aaPredicted RBP2.77□□□□□ -1.97
UBR1-205ENST00000564540 PFN3P60673 137 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 RGS1Q08116 209 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 PDIA5Q14554 519 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 PDK1Q15118 436 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 PTGES3Q15185 160 aaKnown RBP2.77□□□□□ -1.97
UBR1-205ENST00000564540 CCDC40Q4G0X9 1142 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 FAM74A3Q4VXF1 159 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 NEK5Q6P3R8 708 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ISLR2Q6UXK2 745 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 UNQ9370/PRO34162Q6UXP9 181 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 LANCL3Q6ZV70 420 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 EFCAB13Q8IY85 973 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 H1FOOQ8IZA3 346 aaPredicted RBP2.77□□□□□ -1.97
UBR1-205ENST00000564540 TPRX1Q8N7U7 411 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ANKRD20A12PQ8NF67 263 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 RPUSD4Q96CM3 377 aaKnown RBP2.77□□□□□ -1.97
UBR1-205ENST00000564540 SDSLQ96GA7 329 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 RUFY1Q96T51 708 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 VCXQ9H320 206 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 DCDC2Q9UHG0 476 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 RABL2BQ9UNT1 228 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms