RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TRIM10Q9UDY6 481 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CTNNA3Q9UI47 895 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SH3BGRL2Q9UJC5 107 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CA5BQ9Y2D0 317 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 RRP15Q9Y3B9 282 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 TEX264Q9Y6I9 313 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ALPK3Q96L96 1907 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ABCC12Q96J65 1359 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 DUOX1Q9NRD9 1551 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 IGKV6-21A0A0C4DH24 114 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PES1O00541 588 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 STAM2O75886 525 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ACTL6AO96019 429 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 KRT6AP02538 564 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 MT-ND3P03897 115 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 KRT6BP04259 564 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HSPB1P04792 205 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 SLC35G4P0C7Q5 338 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HSPA5P11021 654 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 KRT13P13646 458 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 CD1EP15812 388 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 MAPK3P27361 379 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 RFC2P35250 354 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 UGT1A3P35503 534 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 SLC6A8P48029 635 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 KRT6CP48668 564 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 TDO2P48775 406 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 SLC26A2P50443 739 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 RIPK4P57078 832 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HERVK_113P63132 956 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ERVK-8P63133 956 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ACTN3Q08043 901 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 MRPL28Q13084 256 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 RAB35Q15286 201 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ZKSCAN8Q15776 578 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PKN2Q16513 984 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PARP6Q2NL67 630 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HFEQ30201 348 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF699Q32M78 642 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 DCAF4L1Q3SXM0 396 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PARP10Q53GL7 1025 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HSP90AB3PQ58FF7 597 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 SLC10A5Q5PT55 438 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 BEND6Q5SZJ8 279 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 METTL11BQ5VVY1 283 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 P4HA3Q7Z4N8 544 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PARGQ86W56 976 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF397Q8NF99 534 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 TMEM185AQ8NFB2 350 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 CTNNBL1Q8WYA6 563 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 FRAT1Q92837 279 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 CCDC51Q96ER9 411 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 C16orf74Q96GX8 76 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 CABS1Q96KC9 395 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ERVK-6Q9BXR3 956 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 GLT8D2Q9H1C3 349 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF702PQ9H963 129 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 FAM114A2Q9NRY5 505 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 PLSCR3Q9NRY6 295 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 DCAF13Q9NV06 445 aaKnown RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 HPF1Q9NWY4 346 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 BCAP29Q9UHQ4 241 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 APPL1Q9UKG1 709 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 BLOC1S6Q9UL45 172 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF490Q9ULM2 529 aaPredicted RBP2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 FZR1Q9UM11 496 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 GRIN2DO15399 1336 aa2.12□□□□□ -2.07
HDGFL3-202ENST00000562702 LRRC37AA6NMS7 1700 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 MYH3P11055 1940 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 A0A1B0GUL6 1792 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 RBBP6Q7Z6E9 1792 aaKnown RBP2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 WI2-2373I1.2A0A1W2PRP0 233 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 TMEM89A2RUT3 159 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 WWP2O00308 870 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 VEGFDO43915 354 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 NOL4O94818 638 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 KIAA0754O94854 1291 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 TOXO94900 526 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 GUCA1CO95843 209 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 OLFM2O95897 454 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 IGHDP01880 384 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 PROS1P07225 676 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 IGFBP1P08833 259 aaPredicted RBP2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 CCDC166P0CW27 439 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 NF2P35240 595 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 BPIFB3P59826 476 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 POLR2FP61218 127 aaKnown RBP2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 SRYQ05066 204 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 AP1B1Q10567 949 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 TAF7Q15545 349 aaPredicted RBP2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 ANKDD1AQ495B1 522 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 HSP90B2PQ58FF3 399 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 IL23RQ5VWK5 629 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 LIPKQ5VXJ0 399 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 SCARA5Q6ZMJ2 495 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 AMZ2Q86W34 360 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 NBPF5PQ86XG9 351 aaPredicted RBP2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 C9orf40Q8IXQ3 194 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 BATF2Q8N1L9 274 aa2.11□□□□□ -2.07
HDGFL3-202ENST00000562702 WDR36Q8NI36 951 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms