RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ZNF3P17036 446 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 EN2P19622 333 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NPR2P20594 1047 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 AZGP1P25311 298 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SLC6A6P31641 620 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 PITPNBP48739 271 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 DGKEP52429 567 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 PDX1P52945 283 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NRG3P56975 720 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ACTA2P62736 377 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ACTG2P63267 376 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF155Q12901 538 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TNK1Q13470 666 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 EFR3AQ14156 821 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ZNHIT3Q15649 155 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CARTPTQ16568 116 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TATDN3Q17R31 274 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 AMZ1Q400G9 498 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ZMAT1Q5H9K5 638 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CLEC12AQ5QGZ9 265 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 EXOSC6Q5RKV6 272 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TMEM240Q5SV17 173 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 GARNL3Q5VVW2 1013 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 C18orf63Q68DL7 685 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NIPAL3Q6P499 406 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ARHGAP11AQ6P4F7 1023 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SMARCD3Q6STE5 483 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CREB3L2Q70SY1 520 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 LHFPL3Q86UP9 236 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 COMTD1Q86VU5 262 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 GATAD2AQ86YP4 633 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 GRAMD2AQ8IUY3 354 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CPOQ8IVL8 374 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NKAIN4Q8IVV8 208 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CMIPQ8IY22 773 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SYS1Q8N2H4 156 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 POMGNT2Q8NAT1 580 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SYT14Q8NB59 555 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 OR4Q3Q8NH05 313 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 OR4C6Q8NH72 309 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ZFAND1Q8TCF1 268 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ADAMTS18Q8TE60 1221 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 UBASH3BQ8TF42 649 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SPRYD4Q8WW59 207 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 AKAP1Q92667 903 aaKnown RBP eCLIP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 RERGQ96A58 199 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 RFT1Q96AA3 541 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 HYLS1Q96M11 299 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 FCRL4Q96PJ5 515 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 MYADMQ96S97 322 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TMEM246Q9BRR3 403 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TMED9Q9BVK6 235 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 AICDAQ9GZX7 198 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TWSG1Q9GZX9 223 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 OR52D1Q9H346 318 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 TBC1D17Q9HA65 648 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SIDT1Q9NXL6 827 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 CNIH4Q9P003 139 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ABRACLQ9P1F3 81 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 APOBEC3BQ9UH17 382 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 MOSPD1Q9UJG1 213 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SLC7A7Q9UM01 511 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ING4Q9UNL4 249 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 SLC22A7Q9Y694 548 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 DENND4AQ7Z401 1863 aa6.95□□□□□ -1.3
CFDP1-202ENST00000562602 NUP210Q8TEM1 1887 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 KIF26AQ9ULI4 1882 aaPredicted RBP6.95□□□□□ -1.3
CFDP1-202ENST00000562602 ALPK3Q96L96 1907 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 PRSS38A1L453 326 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 OR5K4A6NMS3 321 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 C12orf71A8MTZ7 269 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 INMT-MINDY4F8WBC2 141 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 BHLHE40O14503 412 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 PDCD5O14737 125 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 TFECO14948 347 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 GPRIN2O60269 458 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 HPGDSO60760 199 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 PPM1BO75688 479 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 ALX3O95076 343 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 GPR75O95800 540 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF888P0CJ79 500 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 C8orf89P0DMQ9 161 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 SAGP10523 405 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 TRHRP34981 398 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 KIR2DL3P43628 341 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 GZMKP49863 264 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 GBX2P52951 348 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 GNG2P59768 71 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 RAB8AP61006 207 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 RRAS2P62070 204 aaPredicted RBP6.94□□□□□ -1.3
CFDP1-202ENST00000562602 YPEL5P62699 121 aa6.94□□□□□ -1.3
CFDP1-202ENST00000562602 POU6F2P78424 691 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms