RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SLC7A2P52569 658 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RAC1P63000 192 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 HSF1Q00613 529 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 LIPEQ05469 1076 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 VEZF1Q14119 521 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 QPRTQ15274 297 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 TAF11Q15544 211 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 BCL2A1Q16548 175 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 C4orf17Q53FE4 359 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RPS26P11Q5JNZ5 115 aaPredicted RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 MRPL2Q5T653 305 aaKnown RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 C1QL3Q5VWW1 255 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 WBP2NLQ6ICG8 309 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RPTNQ6XPR3 784 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 B3GNT6Q6ZMB0 384 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RRM2BQ7LG56 351 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 GRAMD2AQ8IUY3 354 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 MICU2Q8IYU8 434 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 OR52E4Q8NGH9 312 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 SLC25A43Q8WUT9 341 aaPredicted RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 ASB5Q8WWX0 329 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 TPD52L3Q96J77 140 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 RNF145Q96MT1 663 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 TAPBPLQ9BX59 468 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 TRIM2Q9C040 744 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 SLC38A1Q9H2H9 487 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 SERHL2Q9H4I8 314 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 ALG2Q9H553 416 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 KAT8Q9H7Z6 458 aaKnown RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 EXOSC3Q9NQT5 275 aaKnown RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 SLC6A13Q9NSD5 602 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 MED17Q9NVC6 651 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 FAM53CQ9NYF3 392 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 FLRT3Q9NZU0 649 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 ERRFI1Q9UJM3 462 aaPredicted RBP9.73□□□□□ -0.85
TPM1-229ENST00000561242 NTNG1Q9Y2I2 539 aa9.73□□□□□ -0.85
TPM1-229ENST00000561242 IGLV3-32A0A0A0MS00 114 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 A0A1B0GVC2 190 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 LRRC3CA6NJW4 275 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ELOA3DA6NLF2 546 aaPredicted RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 E9PLN8 166 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ZNF682O95780 498 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 NUDT7P0C024 238 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 FCGR2AP12318 317 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 BMP2P12643 396 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 BMP7P18075 431 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CCNA2P20248 432 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CD247P20963 164 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ACVR2AP27037 513 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 PTGDSP41222 190 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 EIF1AXP47813 144 aaKnown RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 POLR2HP52434 150 aaKnown RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 CARD18P57730 90 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CSNK2A1P68400 391 aaPredicted RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 ZNF117Q03924 483 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 SELENBP1Q13228 472 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ELOA3BQ3SY89 546 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 SPATS1Q496A3 300 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 DNAL1Q4LDG9 190 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 RABL3Q5HYI8 236 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 C1orf185Q5T7R7 199 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ZNF324BQ6AW86 544 aaPredicted RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 HBMQ6B0K9 141 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 OR2A2Q6IF42 318 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 C3orf33Q6P1S2 294 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CCDC121Q6ZUS5 278 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 GRINAQ7Z429 371 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 HMGN2P46Q86SG4 172 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 VRK2Q86Y07 508 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 SIAH3Q8IW03 269 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 LILRA2Q8N149 483 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 FAM26EQ8N5C1 309 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 C10orf53Q8N6V4 93 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 FADS6Q8N9I5 356 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ELOA3Q8NG57 546 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 FBXO27Q8NI29 283 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CA5BP1Q8WTZ4 195 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 CDRT15Q96T59 188 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 TIMP4Q99727 224 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 TM9SF2Q99805 663 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 VKORC1Q9BQB6 163 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 ZNF559Q9BR84 538 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 SLC39A3Q9BRY0 314 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 NAA11Q9BSU3 229 aaPredicted RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 QRSL1Q9H0R6 528 aaKnown RBP9.72□□□□□ -0.85
TPM1-229ENST00000561242 RUBCNLQ9H714 662 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 GMEB1Q9Y692 573 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 PTPRQQ9UMZ3 2332 aa9.72□□□□□ -0.85
TPM1-229ENST00000561242 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 CCT8L1PA6NM43 557 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 HSPB2A8KAH6 182 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 EBAG9O00559 213 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 CXCR6O00574 342 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 HIST1H2ABP04908 130 aa9.71□□□□□ -0.86
TPM1-229ENST00000561242 C8BP07358 591 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms