RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 SLC35G5Q96KT7 338 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 CCDC115Q96NT0 180 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 PANX1Q96RD7 426 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 CXXC4Q9H2H0 198 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 MED17Q9NVC6 651 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 GPR45Q9Y5Y3 372 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 AP4B1Q9Y6B7 739 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 USH1CQ9Y6N9 552 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 C2CD3Q4AC94 2353 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 C7orf72A4D263 438 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 SH3D21A4FU49 640 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 MSTNO14793 375 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ANKRD28O15084 1053 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 SIAH2O43255 324 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 SMNDC1O75940 238 aaKnown RBP eCLIP14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ANP32DO95626 131 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 IL11P20809 199 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ME2P23368 584 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 EIF1P41567 113 aaKnown RBP14.33□□□□□ -0.12
LMX1B-204ENST00000561065 UFM1P61960 85 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 RPS26P62854 115 aaKnown RBP14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF117Q03924 483 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 FAM27E3Q08E93 113 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 HSP90B2PQ58FF3 399 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 SPANXN4Q5MJ08 99 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 OR2A2Q6IF42 318 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 PAMR1Q6UXH9 720 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF621Q6ZSS3 439 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 MSANTD1Q6ZTZ1 278 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 CLECL1Q8IZS7 167 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 CLEC4FQ8N1N0 589 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 OR5D16Q8NGK9 328 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 PHOSPHO1Q8TCT1 267 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 MIPOL1Q8TD10 442 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ZBTB8AQ96BR9 441 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF524Q96C55 264 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 RNF145Q96MT1 663 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 OR7D2Q96RA2 312 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 TMEM185BQ9H7F4 350 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 POLE3Q9NRF9 147 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 PAQR5Q9NXK6 330 aaPredicted RBP14.33□□□□□ -0.12
LMX1B-204ENST00000561065 LIPT1Q9Y234 373 aa14.33□□□□□ -0.12
LMX1B-204ENST00000561065 TMEM247A6NEH6 219 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 CCDC154A6NI56 674 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 NPIPB9F8W1W9 429 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 RFXANKO14593 260 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 EIF1AYO14602 144 aaKnown RBP14.32□□□□□ -0.12
LMX1B-204ENST00000561065 OPN1LWP04000 364 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 GUSBP08236 651 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 LINGO3P0C6S8 592 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 CD1EP15812 388 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 SHC1P29353 583 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 KHKP50053 298 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 NME5P56597 212 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 HPCAP84074 193 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 FOXF1Q12946 379 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 NDUFAF6Q330K2 333 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 ARHGAP11BQ3KRB8 267 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 PDSS1Q5T2R2 415 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 CBLN3Q6UW01 205 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 EPGNQ6UW88 154 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 ANKRD46Q86W74 232 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 CHDHQ8NE62 594 aaPredicted RBP14.32□□□□□ -0.12
LMX1B-204ENST00000561065 OR10D3Q8NH80 312 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 B4GALNT2Q8NHY0 566 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 XAGE5Q8WWM1 108 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 PMM1Q92871 262 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 NEURL3Q96EH8 262 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 ITCHQ96J02 903 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 DACH2Q96NX9 599 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 SDF2Q99470 211 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 FOXC2Q99958 501 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 SLC35A5Q9BS91 424 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 CCDC28BQ9BUN5 200 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 RABEP2Q9H5N1 569 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 PLEKHF2Q9H8W4 249 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 TMEM45AQ9NWC5 275 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 THUMPD1Q9NXG2 353 aaKnown RBP14.32□□□□□ -0.12
LMX1B-204ENST00000561065 DTNAQ9Y4J8 743 aa14.32□□□□□ -0.12
LMX1B-204ENST00000561065 RAI1Q7Z5J4 1906 aaPredicted RBP14.31□□□□□ -0.12
LMX1B-204ENST00000561065 CENPVL1A0A0U1RR11 272 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 EIF4E2O60573 245 aaKnown RBP14.31□□□□□ -0.12
LMX1B-204ENST00000561065 SCN2BO60939 215 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 NUDT14O95848 222 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 ALDOCP09972 364 aaKnown RBP14.31□□□□□ -0.12
LMX1B-204ENST00000561065 EIF1AXP47813 144 aaKnown RBP14.31□□□□□ -0.12
LMX1B-204ENST00000561065 SUMO3P55854 103 aaPredicted RBP14.31□□□□□ -0.12
LMX1B-204ENST00000561065 GNA13Q14344 377 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 SLC9B1Q4ZJI4 515 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 TTMPQ5BVD1 217 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 OLIG3Q7RTU3 272 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 SIKE1Q9BRV8 207 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 NMUR2Q9GZQ4 415 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 SDR39U1Q9NRG7 319 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms