RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZNF232Q9UNY5 417 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CARD8Q9Y2G2 431 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 CACNA1CQ13936 2221 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 HCFC1P51610 2035 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 NAV2Q8IVL1 2488 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 FLNCQ14315 2725 aa8.73□□□□□ -1.01
RABGGTA-221ENST00000561055 A0A1B0GUH1 482 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 CDHR4A6H8M9 788 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 C5orf58C9J3I9 102 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 GTPBP1O00178 669 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 PRRG2O14669 202 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 HCRTR2O43614 444 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 GCM2O75603 506 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 NTN1O95631 604 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 HOXD4P09016 255 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF17P17021 662 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 HK1P19367 917 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 PCGF2P35227 344 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 EIF1P41567 113 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC6A8P48029 635 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 MNAT1P51948 309 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 HSF1Q00613 529 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 CBFBQ13951 182 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 LARS2Q15031 903 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 TOMM20Q15388 145 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 CYP51A1Q16850 503 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 EIF2S3LQ2VIR3 472 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 GXYLT1Q4G148 440 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 LIN52Q52LA3 116 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 MRPL2Q5T653 305 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 WLSQ5T9L3 541 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 INTS11Q5TA45 600 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 AAGABQ6PD74 315 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 DHRS4L2Q6PKH6 230 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ENPP6Q6UWR7 440 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ARSKQ6UWY0 536 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 YRDCQ86U90 279 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 KRT73Q86Y46 540 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF440Q8IYI8 595 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 PM20D2Q8IYS1 436 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 GTPBP8Q8N3Z3 284 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF614Q8N883 585 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 OR14L1PQ8NHC6 308 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 NFKBIDQ8NI38 313 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ABTB1Q969K4 478 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZBTB8AQ96BR9 441 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 WDYHV1Q96HA8 205 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 REXO5Q96IC2 774 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF607Q96SK3 696 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 PIGQQ9BRB3 760 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 SPATA5L1Q9BVQ7 753 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 RSPO3Q9BXY4 272 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 UGT2B28Q9BY64 529 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 TRIM8Q9BZR9 551 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 PRDM14Q9GZV8 571 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 MED17Q9NVC6 651 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 CMTM6Q9NX76 183 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 DKKL1Q9UK85 242 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 OSGIN2Q9Y236 505 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ANGPT4Q9Y264 503 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF443Q9Y2A4 671 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 CHST2Q9Y4C5 530 aa8.72□□□□□ -1.01
RABGGTA-221ENST00000561055 SPTBN1Q01082 2364 aaKnown RBP8.71□□□□□ -1.01
RABGGTA-221ENST00000561055 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 OR2M5A3KFT3 312 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PRORSD1PA6NEY8 169 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 WIPF3A6NGB9 483 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 CLDN24A6NM45 220 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 AHRRA9YTQ3 701 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 FAM220BPB1ANY3 271 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 NPIPA2E9PIF3 369 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 E9PLN8 166 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 NPIPA3F8WFD2 350 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 WDR1O75083 606 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 BCAS1O75363 584 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 SERPINB7O75635 380 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 MFN2O95140 757 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 C8BP07358 591 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PEPDP12955 493 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 GABRA1P14867 456 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ABOP16442 354 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PRKCAP17252 672 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PGCP20142 388 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PRKAR1BP31321 381 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PTGER4P35408 488 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 GCKP35557 465 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 LHX2P50458 406 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 NUDT2P50583 147 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF41P51814 821 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 EEFSECP57772 596 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PSME3P61289 254 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 C3AR1Q16581 482 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF311Q5JNZ3 666 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 RPS26P11Q5JNZ5 115 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PATL1Q86TB9 770 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 VRK2Q86Y07 508 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 EID3Q8N140 333 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms