RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TUBBP07437 444 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 PABPC4LP0CB38 370 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 G6PDP11413 515 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 AGTR1P30556 359 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 ETV4P43268 484 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 RNF144AP50876 292 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 C21orf58P58505 322 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 HBA1P69905 142 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 ZNF239Q16600 458 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 BEX5Q5H9J7 111 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 PRSS57Q6UWY2 283 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 FBXO27Q8NI29 283 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 GPR119Q8TDV5 335 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 RNF128Q8TEB7 428 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 AENQ8WTP8 325 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 ROBO4Q8WZ75 1007 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 CPNE4Q96A23 557 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 REXO5Q96IC2 774 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 DUSP26Q9BV47 211 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 ACTR6Q9GZN1 396 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 GPR52Q9Y2T5 361 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 DTNAQ9Y4J8 743 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 GPC6Q9Y625 555 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 NSD1Q96L73 2696 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 GJE1A6NN92 205 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 PSMB1P20618 241 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 CLDN8P56748 225 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 EMX2Q04743 252 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 LTBQ06643 244 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 RNPS1Q15287 305 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 TOMM34Q15785 309 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 TMEM176BQ3YBM2 270 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 BHLHB9Q6PI77 547 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 OR5AK3PQ8NH89 298 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 ABHD3Q8WU67 409 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 OR7D2Q96RA2 312 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 SDF2Q99470 211 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 SRXN1Q9BYN0 137 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 OR10A4Q9H209 315 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 C12orf49Q9H741 205 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 ZNF395Q9H8N7 513 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 NTN1O95631 604 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 PRKCAP17252 672 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 NR1H2P55055 460 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 MAD2L1Q13257 205 aaPredicted RBP14.46□□□□□ -0.1
SNX1-213ENST00000561026 PGS1Q32NB8 556 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 NDUFAF6Q330K2 333 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 EMBQ6PCB8 327 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 Q71RC1 249 aaPredicted RBP14.46□□□□□ -0.1
SNX1-213ENST00000561026 NUDCD3Q8IVD9 361 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 PPP1R14CQ8TAE6 165 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 ZNF524Q96C55 264 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 MRGPRX4Q96LA9 322 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 TMEM109Q9BVC6 243 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 GP6Q9HCN6 339 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 ASIC5Q9NY37 505 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 NOP53Q9NZM5 478 aaKnown RBP14.46□□□□□ -0.1
SNX1-213ENST00000561026 ABCA2Q9BZC7 2435 aa14.46□□□□□ -0.1
SNX1-213ENST00000561026 DSCAMO60469 2012 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 DUXAA6NLW8 204 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 ZNF264O43296 627 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 EIF4E2O60573 245 aaKnown RBP14.45□□□□□ -0.1
SNX1-213ENST00000561026 RPS26P62854 115 aaKnown RBP14.45□□□□□ -0.1
SNX1-213ENST00000561026 SMU1Q2TAY7 513 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 SLC25A53Q5H9E4 307 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 TMEM201Q5SNT2 666 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 CLEC9AQ6UXN8 241 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 ZNF704Q6ZNC4 412 aaPredicted RBP14.45□□□□□ -0.1
SNX1-213ENST00000561026 PLEKHM3Q6ZWE6 761 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 YTHDF3Q7Z739 585 aaKnown RBP14.45□□□□□ -0.1
SNX1-213ENST00000561026 WFDC8Q8IUA0 241 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 TUSC5Q8IXB3 177 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 ZNF614Q8N883 585 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 OR5W2Q8NH69 310 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 ARSGQ96EG1 525 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 PERPQ96FX8 193 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 Q96MF0 132 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 ZIM3Q96PE6 472 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 HDHD5Q9BXW7 423 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 NMUR2Q9GZQ4 415 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 KLHL13Q9P2N7 655 aa14.45□□□□□ -0.1
SNX1-213ENST00000561026 PRR14LQ5THK1 2151 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 FAM171A2A8MVW0 826 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 ESPNB1AK53 854 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 ETV2O00321 342 aaPredicted RBP14.44□□□□□ -0.1
SNX1-213ENST00000561026 ITM2AO43736 263 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 PRKD3O94806 890 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 UBL4AP11441 157 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 MATN1P21941 496 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 SOAT1P35610 550 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 QPRTQ15274 297 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 PDZK1Q5T2W1 519 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 OR4F3Q6IEY1 312 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 WDR93Q6P2C0 686 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 TFAP2EQ6VUC0 442 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 FCRLAQ7L513 359 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 NUFIP2Q7Z417 695 aaKnown RBP14.44□□□□□ -0.1
SNX1-213ENST00000561026 C6orf120Q7Z4R8 191 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 CLECL1Q8IZS7 167 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms