RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	GALNTL6	Q49A17	601 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	ARL13A	Q5H913	290 aa	Predicted RBP	12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	NCMAP	Q5T1S8	102 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	AP1AR	Q63HQ0	302 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	TFAP2E	Q6VUC0	442 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	BANP	Q8N9N5	519 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	OR7A2P	Q8NGA2	310 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	FBXO27	Q8NI29	283 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	RAB3IL1	Q8TBN0	382 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	PHOSPHO1	Q8TCT1	267 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	ABHD3	Q8WU67	409 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	OR5P2	Q8WZ92	322 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	CDS1	Q92903	461 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	S100PBP	Q96BU1	408 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	REXO5	Q96IC2	774 aa	Known RBP	12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	MDFI	Q99750	246 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	SRXN1	Q9BYN0	137 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	C12orf49	Q9H741	205 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	TMEM185B	Q9H7F4	350 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	KLHL13	Q9P2N7	655 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	MID2	Q9UJV3	735 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	KCNE3	Q9Y6H6	103 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	CR1	P17927	2039 aa		12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	YLPM1	P49750	1951 aa	Known RBP	12.14	□□□□□ -0.47
RNF31-223	ENST00000560754	HEATR1	Q9H583	2144 aa	Known RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	GJE1	A6NN92	205 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ESPN	B1AK53	854 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TMEM233	B4DJY2	109 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ZNF814	B7Z6K7	855 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	SCAMP2	O15127	329 aa	Known RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	LYPLA1	O75608	230 aa	Predicted RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	CHRNG	P07510	517 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	PRKCA	P17252	672 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	PCSK6	P29122	969 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ALDH3A1	P30838	453 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	SFTPD	P35247	375 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	RPL3	P39023	403 aa	Known RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	SUMO3	P55854	103 aa	Predicted RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ATP5J2	P56134	94 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	RAC3	P60763	192 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TNK1	Q13470	666 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TAB1	Q15750	504 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TOMM34	Q15785	309 aa	Predicted RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	XKR7	Q5GH72	579 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TMEM201	Q5SNT2	666 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	C6orf136	Q5SQH8	315 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	SZRD1	Q7Z422	152 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	RIMKLA	Q8IXN7	391 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	C4orf33	Q8N1A6	199 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	SLC43A2	Q8N370	569 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ZNF527	Q8NB42	609 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	PIWIL2	Q8TC59	973 aa	Known RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	EPS8L3	Q8TE67	593 aa	Known RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	TWIST2	Q8WVJ9	160 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	OTUB1	Q96FW1	271 aa	Predicted RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	MRGPRX4	Q96LA9	322 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	PPP3R2	Q96LZ3	170 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	CXorf36	Q9H7Y0	433 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	MKS1	Q9NXB0	559 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	ING1	Q9UK53	422 aa	Predicted RBP	12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	LAMP3	Q9UQV4	416 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	CARD8	Q9Y2G2	431 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	FIS1	Q9Y3D6	152 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	DTNA	Q9Y4J8	743 aa		12.13	□□□□□ -0.47
RNF31-223	ENST00000560754	UQCRHL	A0A096LP55	91 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	INAFM1	C9JVW0	142 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754		H3BNH8	94 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	PIP5K1B	O14986	540 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	EIF4E2	O60573	245 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ATP6V1C1	P21283	382 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ENPP1	P22413	925 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	MAPK1	P28482	360 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	KRTAP1-1	Q07627	177 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	FOXF1	Q12946	379 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ITGAD	Q13349	1161 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	LSM12	Q3MHD2	195 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	DCST2	Q5T1A1	773 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	SEZ6L2	Q6UXD5	910 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	FCRLA	Q7L513	359 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	DDIAS	Q8IXT1	998 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	GSPT2	Q8IYD1	628 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	OR56A1	Q8NGH5	318 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ADAMTS15	Q8TE58	950 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	JADE3	Q92613	823 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	C3orf30	Q96M34	536 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	SDF2	Q99470	211 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	TACO1	Q9BSH4	297 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ESRP2	Q9H6T0	727 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	COQ10B	Q9H8M1	238 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ANKZF1	Q9H8Y5	726 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	BCO1	Q9HAY6	547 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	EML4	Q9HC35	981 aa	Known RBP	12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	NGB	Q9NPG2	151 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	ADAM21	Q9UKJ8	722 aa		12.12	□□□□□ -0.47
RNF31-223	ENST00000560754	RNF115	Q9Y4L5	304 aa		12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms