RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 REEP3Q6NUK4 255 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF585AQ6P3V2 769 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 NCCRP1Q6ZVX7 275 aaPredicted RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 SERPINA11Q86U17 422 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 FITM2Q8N6M3 262 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 C11orf65Q8NCR3 313 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 HIPK4Q8NE63 616 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 BCAS4Q8TDM0 211 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 PMM1Q92871 262 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 SH3GL1Q99961 368 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 RLIMQ9NVW2 624 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ERRFI1Q9UJM3 462 aaPredicted RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 CAMK2AQ9UQM7 478 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ANGPT4Q9Y264 503 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 HELZ2Q9BYK8 2649 aaKnown RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 A0A087WZY1 265 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 FAM47E-STBD1D6RA91 191 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CCL21O00585 134 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 ADAM11O75078 769 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 ACTL6AO96019 429 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 LINGO3P0C6S8 592 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 PABPC4LP0CB38 370 aaKnown RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 GCKP35557 465 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 LHX2P50458 406 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 SUMO3P55854 103 aaPredicted RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 EEF1A1P68104 462 aaKnown RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 RBBP4Q09028 425 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 FOXF1Q12946 379 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CBFBQ13951 182 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 TMEM44Q2T9K0 475 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 LIN52Q52LA3 116 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 WLSQ5T9L3 541 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 FAM91A1Q658Y4 838 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 C8orf82Q6P1X6 216 aaPredicted RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 HACD2Q6Y1H2 254 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 LSRQ86X29 649 aaPredicted RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CALHM3Q86XJ0 350 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CMIPQ8IY22 773 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 RPRMLQ8N4K4 120 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 TOR1AIP2Q8NFQ8 470 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 OR5W2Q8NH69 310 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 POC1BQ8TC44 478 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 GPR119Q8TDV5 335 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 DNAJB12Q9NXW2 375 aaKnown RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 GMPR2Q9P2T1 348 aaKnown RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 KIAA1549Q9HCM3 1950 aa14.03□□□□□ -0.16
LYSMD2-204ENST00000560491 MYO18BQ8IUG5 2567 aa14.02□□□□□ -0.16
LYSMD2-204ENST00000560491 ARHGAP21Q5T5U3 1957 aa14.02□□□□□ -0.16
LYSMD2-204ENST00000560491 CDHR4A6H8M9 788 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 H3BML4 177 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 AP3D1O14617 1153 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 THBS1P07996 1170 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ETS2P15036 469 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF17P17021 662 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 IL11P20809 199 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 CHMP24386 653 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 RYKP34925 604 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 PCGF2P35227 344 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 SLC7A2P52569 658 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 SRYQ05066 204 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 LARS2Q15031 903 aaKnown RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 QPRTQ15274 297 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 GLYR1Q49A26 553 aaPredicted RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF311Q5JNZ3 666 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 AAGABQ6PD74 315 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 SLC15A3Q8IY34 581 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 CLIP4Q8N3C7 705 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 GTPBP8Q8N3Z3 284 aaPredicted RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 FBXO27Q8NI29 283 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 SMPDL3BQ92485 455 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 RELTQ969Z4 430 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ZBTB8AQ96BR9 441 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 WDYHV1Q96HA8 205 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 RNF145Q96MT1 663 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF583Q96ND8 569 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 PIGQQ9BRB3 760 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 PRDM14Q9GZV8 571 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 TP63Q9H3D4 680 aaPredicted RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 CACYBPQ9HB71 228 aaKnown RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 EXOSC3Q9NQT5 275 aaKnown RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 TAGLN3Q9UI15 199 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 SLC5A6Q9Y289 635 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 IFT52Q9Y366 437 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF337Q9Y3M9 751 aa14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 FASNP49327 2511 aaKnown RBP14.02□□□□□ -0.17
LYSMD2-204ENST00000560491 A0A1B0GUH1 482 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 FIGNL2A6NMB9 653 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 KDM4EB2RXH2 506 aaPredicted RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 NME4O00746 187 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 DNAJA2O60884 412 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 GCM2O75603 506 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms