RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 A0A1B0GTH9 108 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 A0A1B0GVC2 190 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 ELOVL7A1L3X0 281 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 M0QX08 132 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 AP3D1O14617 1153 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 DNAJA2O60884 412 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 HK1P19367 917 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 UQCRFS1P47985 274 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 CCR4P51679 360 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 SUMO3P55854 103 aaPredicted RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 GANABQ14697 944 aaKnown RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 LARS2Q15031 903 aaKnown RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 KRTCAP3Q53RY4 240 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 DHRS4L2Q6PKH6 230 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 GFRALQ6UXV0 394 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 KRT73Q86Y46 540 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 SMYD1Q8NB12 490 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 FAM156AQ8NDB6 213 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 GPR32P1Q8NGA4 272 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 OR5M1Q8NGP8 315 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 OR5W2Q8NH69 310 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 GPR119Q8TDV5 335 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 CDRT15Q96T59 188 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 KCTD14Q9BQ13 255 aaPredicted RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 PTGES2Q9H7Z7 377 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 EXOSC3Q9NQT5 275 aaKnown RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 TAS2R1Q9NYW7 299 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 TNFRSF10DQ9UBN6 386 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 CD300AQ9UGN4 299 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 RPH3AQ9Y2J0 694 aaPredicted RBP19.75■□□□□ 0.75
SNX1-210ENST00000560260 NBASA2RRP1 2371 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 FRS3O43559 492 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 LINGO3P0C6S8 592 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 CD247P20963 164 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 PRKAR1BP31321 381 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 BNIP1Q12981 228 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 CEACAM7Q14002 265 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 TMEM44Q2T9K0 475 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 PLPPR5Q32ZL2 321 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 DCST1Q5T197 706 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 INTS11Q5TA45 600 aaKnown RBP19.74■□□□□ 0.75
SNX1-210ENST00000560260 ARMC8Q8IUR7 673 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 TOR1AIP2Q8NFQ8 470 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 OR14L1PQ8NHC6 308 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 NEIL3Q8TAT5 605 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 POC1BQ8TC44 478 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 SLC7A6OSQ96CW6 309 aaPredicted RBP19.74■□□□□ 0.75
SNX1-210ENST00000560260 ZNF607Q96SK3 696 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 WFDC6Q9BQY6 131 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 HHATLQ9HCP6 504 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 NDE1Q9NXR1 346 aa19.74■□□□□ 0.75
SNX1-210ENST00000560260 MRPS18CQ9Y3D5 142 aaKnown RBP19.74■□□□□ 0.75
SNX1-210ENST00000560260 TMEM229AB2RXF0 380 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 HCN1O60741 890 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 GKN3PP0CG01 181 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 PRG2P13727 222 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 GFRA1P56159 465 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 FOXF1Q12946 379 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 PATL1Q86TB9 770 aaKnown RBP19.73■□□□□ 0.75
SNX1-210ENST00000560260 GRAMD2AQ8IUY3 354 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 GALNT11Q8NCW6 608 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 SPATA5L1Q9BVQ7 753 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 LDAHQ9H6V9 325 aa19.73■□□□□ 0.75
SNX1-210ENST00000560260 DNAJC13O75165 2243 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 RELNP78509 3460 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 OR2M5A3KFT3 312 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 AQP7O14520 342 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 SUSD5O60279 629 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 HSD17B1P14061 328 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 NCK1P16333 377 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 RYKP34925 604 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 QPRTQ15274 297 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 FXNQ16595 210 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 DUSP7Q16829 419 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 SAMD4BQ5PRF9 694 aaKnown RBP19.72■□□□□ 0.75
SNX1-210ENST00000560260 RAET1LQ5VY80 246 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 UGT2B28Q9BY64 529 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 CACYBPQ9HB71 228 aaKnown RBP19.72■□□□□ 0.75
SNX1-210ENST00000560260 EGFL7Q9UHF1 273 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 ZNF232Q9UNY5 417 aa19.72■□□□□ 0.75
SNX1-210ENST00000560260 ZGRF1Q86YA3 2104 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 A0A087WZY1 265 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 CXCR6O00574 342 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 SERPINB7O75635 380 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 NUDT14O95848 222 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 PRKCAP17252 672 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 GGT1P19440 569 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 TCN1P20061 433 aaPredicted RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 GNLYP22749 145 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 PSMA4P25789 261 aaKnown RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 KDELR2P33947 212 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 MSX2P35548 267 aaPredicted RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 ACAA2P42765 397 aaKnown RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 KCNJ5P48544 419 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 ZNF41P51814 821 aaPredicted RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 CRYZQ08257 329 aaKnown RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 EPS8Q12929 822 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 CBFBQ13951 182 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 LRRC23Q53EV4 343 aaPredicted RBP19.71■□□□□ 0.75
SNX1-210ENST00000560260 ARHGAP11AQ6P4F7 1023 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms