RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TYK2P29597 1187 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 GABRA3P34903 492 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 SERPINB9P50453 376 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF83P51522 516 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 PDLIM3Q53GG5 364 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 LETMD1Q6P1Q0 360 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 RPS27LQ71UM5 84 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 OR2L13Q8N349 312 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 OR4C3Q8NH37 302 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 SH3YL1Q96HL8 342 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 BBS4Q96RK4 519 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 PSD2Q9BQI7 771 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 INPP5KQ9BT40 448 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 VPS11Q9H270 941 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 COQ10BQ9H8M1 238 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 VPS29Q9UBQ0 182 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 PMF1-BGLAPU3KQ54 211 aa11.26□□□□□ -0.61
RABGGTA-213ENST00000560127 IGHV3-15A0A0B4J1V0 119 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 C9JVG2 144 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 PCDH7O60245 1069 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 OXSR1O95747 527 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 JUNP05412 331 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 LINGO3P0C6S8 592 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 BMP4P12644 408 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 CHN1P15882 459 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 HSD17B3P37058 310 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 NCBP2P52298 156 aaKnown RBP eCLIP11.25□□□□□ -0.611e-10■■■□□ 14.8
RABGGTA-213ENST00000560127 CHRNB3Q05901 458 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 FOXF1Q12946 379 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 HEPACAMQ14CZ8 416 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 TCHHL1Q5QJ38 904 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 WDR93Q6P2C0 686 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 KLHL17Q6TDP4 642 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 TIFABQ6ZNK6 161 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 CCDC91Q7Z6B0 441 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 SLC43A2Q8N370 569 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 OR52N5Q8NH56 324 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 C16orf78Q8WTQ4 265 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 PIK3R3Q92569 461 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF775Q96BV0 537 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 SORCS2Q96PQ0 1159 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 BHLHE41Q9C0J9 482 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 NMRK1Q9NWW6 199 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 TMEFF2Q9UIK5 374 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF225Q9UK10 706 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 SNX6Q9UNH7 406 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 SLC25A15Q9Y619 301 aa11.25□□□□□ -0.61
RABGGTA-213ENST00000560127 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 GNG14A0A1W2PPG7 69 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 LOC390937A0A1W2PQ73 354 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 A0A1W2PR80 420 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 LRP5LA4QPB2 252 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 STX16-NPEPL1H3BU86 382 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 STX16O14662 325 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 RGS14O43566 566 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 RAD51DO75771 328 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 SLITRK5O94991 958 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 KCNH1O95259 989 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 NGFRP08138 427 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 SNRPAP09012 282 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ELK4P28324 431 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 EIF1P41567 113 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 CHRNEQ04844 493 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNHIT3Q15649 155 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 CARTPTQ16568 116 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 MST1LQ2TV78 715 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 TMEM176BQ3YBM2 270 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 KLC3Q6P597 504 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ZAR1Q86SH2 424 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF75CPQ92670 426 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ELP4Q96EB1 424 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF300Q96RE9 604 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 BPESC1Q9GZL8 116 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 C3orf14Q9HBI5 128 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 DDX18Q9NVP1 670 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 KLHL9Q9P2J3 617 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 EMCNQ9ULC0 261 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 ATP23Q9Y6H3 246 aa11.24□□□□□ -0.61
RABGGTA-213ENST00000560127 A0A0A6YYJ9 748 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 A0A1W2PPM1 405 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 TMEM89A2RUT3 159 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 SLCO1B7G3V0H7 640 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 M0R1B8 84 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF195O14628 629 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 RPS17P08708 135 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 HSD3B1P14060 373 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 TSPAN8P19075 237 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 HSD3B2P26439 372 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms