RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 BSNQ9UPA5 3926 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 KALRNO60229 2985 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 LRRC3CA6NJW4 275 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 FRS3O43559 492 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 BCAS1O75363 584 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 CRYABP02511 175 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 FESP07332 822 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 LINGO3P0C6S8 592 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 UQCRBP14927 111 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF24P17028 368 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 DPP4P27487 766 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 RGS8P57771 180 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 SKP2Q13309 424 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 CBFBQ13951 182 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 FLOT2Q14254 428 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 SLC10A1Q14973 349 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 EID3Q8N140 333 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 OR5W2Q8NH69 310 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF563Q8TA94 476 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 VANGL1Q8TAA9 524 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 RNF145Q96MT1 663 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 RAB3IPQ96QF0 476 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 DCAF13Q9NV06 445 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 SLC7A8Q9UHI5 535 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 SAMD4AQ9UPU9 718 aaKnown RBP13.06□□□□□ -0.32
SMAD6-204ENST00000559931 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 C15orf41Q9Y2V0 281 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 V9GYQ6 96 aa13.06□□□□□ -0.32
SMAD6-204ENST00000559931 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 ADAM10O14672 748 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 PRKD3O94806 890 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 LGI1O95970 557 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 C8BP07358 591 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 HK1P19367 917 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 PGCP20142 388 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 CD247P20963 164 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 MAGEA5P43359 124 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 SLC6A8P48029 635 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 CRYBA2P53672 197 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 COPZ1P61923 177 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 HOXC5Q00444 222 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 INAQ16352 499 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 FXNQ16595 210 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 GRAMD2AQ8IUY3 354 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 TMEM251Q8N6I4 163 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 FADS6Q8N9I5 356 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 Q8NA96 180 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 OR14L1PQ8NHC6 308 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 NTNG2Q96CW9 530 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 TAAR6Q96RI8 345 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-204ENST00000559931 LDAHQ9H6V9 325 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 EXO5Q9H790 373 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
SMAD6-204ENST00000559931 ICAM5Q9UMF0 924 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 POMPQ9Y244 141 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
SMAD6-204ENST00000559931 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 M0R3H8 397 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 SYT5O00445 386 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 GLSO94925 669 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 GP1BBP13224 206 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 PRG2P13727 222 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 TNFRSF1BP20333 461 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 OR1E2P47887 323 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 IDH2P48735 452 aaKnown RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 SUMO3P55854 103 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 MTX3Q5HYI7 312 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 RNFT1Q5M7Z0 435 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 LCN8Q6JVE9 175 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 VTCN1Q7Z7D3 282 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 YRDCQ86U90 279 aaKnown RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-204ENST00000559931 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 CARM1Q86X55 608 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 CADM2Q8N3J6 435 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 FAM109AQ8N4B1 249 aa13.04□□□□□ -0.32
SMAD6-204ENST00000559931 FAM71CQ8NEG0 241 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms