RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 OR52L1Q8NGH7 329 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CNOT9Q92600 299 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 MRGPRX1Q96LB2 322 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PTCHD1Q96NR3 888 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SOSTQ9BQB4 213 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 MOV10Q9HCE1 1003 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 RANGRFQ9HD47 186 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PCOLCE2Q9UKZ9 415 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 NCKAP1Q9Y2A7 1128 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 HMX3A6NHT5 357 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 CYR61O00622 381 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 CHST10O43529 356 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ADAM11O75078 769 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 GYPBP06028 91 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 SAGP10523 405 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 IL9P15248 144 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 DDOSTP39656 456 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 EMDP50402 254 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 VSX2P58304 361 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RACK1P63244 317 aaKnown RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 FOXK2Q01167 660 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ACSM1Q08AH1 577 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 IDNKQ5T6J7 187 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 TRIQKQ629K1 86 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ARL9Q6T311 187 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 SAMD14Q8IZD0 417 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ENKURQ8TC29 256 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 PTP4A1Q93096 173 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RERGQ96A58 199 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RNF121Q9H920 327 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 IL21RQ9HBE5 538 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 KRCC1Q9NPI7 259 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 MEPEQ9NQ76 525 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 PLSCR3Q9NRY6 295 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 A0A1B0GVC2 190 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 DAPL1A0PJW8 107 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 URADA6NGE7 173 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 A6NIN4 97 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 FAM25AB3EWG3 89 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 FAM25CB3EWG5 89 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 FAM25GB3EWG6 89 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 GNB5O14775 395 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 SEC14L5O43304 696 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RDH16O75452 317 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RGS9O75916 674 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 PPP1R3DO95685 299 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 APBB3O95704 486 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 GPR75O95800 540 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 HOXC4P09017 264 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 BMP7P18075 431 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 SHC1P29353 583 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 CTHP32929 405 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 EVX1P49640 407 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 E2F1Q01094 437 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 PRPF38BQ5VTL8 546 aaKnown RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 PAMR1Q6UXH9 720 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 RPTNQ6XPR3 784 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 GID4Q8IVV7 300 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ACBD7Q8N6N7 88 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 CDRT4Q8N9R6 151 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 OR4N2Q8NGD1 307 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 SLC7A6Q92536 515 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 KIAA1143Q96AT1 154 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-216ENST00000559819 BPIFA2Q96DR5 249 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 ASB6Q9NWX5 421 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 BABAM2Q9NXR7 383 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 FLRT3Q9NZU0 649 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 CLCA3PQ9Y6N3 262 aa9.3□□□□□ -0.92
LRRC28-216ENST00000559819 USP34Q70CQ2 3546 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 ATP1B1P05026 303 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 PSKH1P11801 424 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 ELK1P19419 428 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 HNRNPA2B1P22626 353 aaKnown RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 MAP2K3P46734 347 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 RPS5P46782 204 aaKnown RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR10A3P58181 314 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 POU6F2P78424 691 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 CD83Q01151 205 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 SLC3A1Q07837 685 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 CRMP1Q14194 572 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 QPRTQ15274 297 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 AMZ1Q400G9 498 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 Q6ZSR6 202 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 RFLNBQ8N5W9 214 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 CSNK1A1LQ8N752 337 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 C19orf18Q8NEA5 215 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR13H1Q8NG92 308 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR52R1Q8NGF1 315 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 BAHD1Q8TBE0 780 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 FRMD6Q96NE9 622 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 LYRM4Q9HD34 91 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 HRASLS2Q9NWW9 162 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 SIGLEC7Q9Y286 467 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 HRKO00198 91 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms