RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 AGAP4Q96P64 663 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 KRT84Q9NSB2 600 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 RYDENQ9NUL5 291 aaKnown RBP15.17■□□□□ 0.02
TPM1-219ENST00000559397 RLIMQ9NVW2 624 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 KIF17Q9P2E2 1029 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 TEKT2Q9UIF3 430 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 NPFFR2Q9Y5X5 522 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 EXPH5Q8NEV8 1989 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 ACACBO00763 2458 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 TRBV4-1A0A0J9YWV2 114 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 LOC100130705A0A1B0GUX0 176 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 NPIPB9F8W1W9 429 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 TSPAN2O60636 221 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 UGT2B17O75795 530 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 CCNB2O95067 398 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 CDH2P19022 906 aaPredicted RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 ELAVL4P26378 380 aaKnown RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 POLR2IP36954 125 aaKnown RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 NRG3P56975 720 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 PLCXD2Q0VAA5 305 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 PIN1Q13526 163 aaPredicted RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 EIPR1Q53HC9 387 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 GALNT5Q7Z7M9 940 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 OFCC1Q8IZS5 231 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 BEST3Q8N1M1 668 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 OMA1Q96E52 524 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 CNTNAP3BQ96NU0 1288 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 GABARAPL3Q9BY60 117 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 CNTNAP3Q9BZ76 1288 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 PRORYQ9H606 182 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 MAN2C1Q9NTJ4 1040 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 STMN3Q9NZ72 180 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 CLDN24A6NM45 220 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 H3BNH8 94 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 FAAHO00519 579 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 UGT2B11O75310 529 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 OR6B1O95007 311 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 OXSR1O95747 527 aaPredicted RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 IL33O95760 270 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 ITGB2P05107 769 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 FBXO45P0C2W1 286 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 NAGAP17050 411 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 SOX3P41225 446 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 ST13P50502 369 aaKnown RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 SSR4P51571 173 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 RPS6KA3P51812 740 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 IL18R1Q13478 541 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 DECR1Q16698 335 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 ZNF468Q5VIY5 522 aaPredicted RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 ABHD17BQ5VST6 288 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 ISLR2Q6UXK2 745 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 LINC00696Q6ZRV3 163 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 OR9Q2Q8NGE9 314 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 DIO2Q92813 273 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 EXTL1Q92935 676 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 ZBTB20Q9HC78 741 aaPredicted RBP15.16■□□□□ 0.02
TPM1-219ENST00000559397 TMCC3Q9ULS5 477 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 PCDHGA10Q9Y5H3 936 aa15.16■□□□□ 0.02
TPM1-219ENST00000559397 TPRP12270 2363 aaKnown RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 NPIPA5A0A0B4J1W7 369 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 CDHR4A6H8M9 788 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 TRIM64A6NGJ6 449 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 NPIPA7E9PJI5 369 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 FRS3O43559 492 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 PPM1BO75688 479 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 SMIM18P0DKX4 95 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 NPIPA8P0DM63 369 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 RGS8P57771 180 aaPredicted RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 MFAP5Q13361 173 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 KEAP1Q14145 624 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 SEC23BQ15437 767 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-219ENST00000559397 ZNF791Q3KP31 576 aaPredicted RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 FLYWCH1Q4VC44 716 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 DCST1Q5T197 706 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 ZNF691Q5VV52 312 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 IGFL2Q6UWQ7 119 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 ASB15Q8WXK1 588 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 EFHD2Q96C19 240 aaPredicted RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 SMAD5Q99717 465 aaKnown RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 G6PC3Q9BUM1 346 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 FNDC11Q9BVV2 318 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 EVA1AQ9H8M9 152 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 NDRG4Q9ULP0 352 aaKnown RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 POFUT2Q9Y2G5 429 aa15.15■□□□□ 0.02
TPM1-219ENST00000559397 PCDHGA9Q9Y5G4 932 aaKnown RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 DSPP15924 2871 aaKnown RBP15.15■□□□□ 0.02
TPM1-219ENST00000559397 SH3PXD2BA1X283 911 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 OR6C70A6NIJ9 312 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 CDK2AP1O14519 115 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 REM1O75628 298 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 CLK3P49761 638 aaKnown RBP15.14■□□□□ 0.01
TPM1-219ENST00000559397 ZNF136P52737 540 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 PNLIPRP2P54317 469 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 ZNF141Q15928 474 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 NTRK2Q16620 822 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 FGD3Q5JSP0 725 aa15.14■□□□□ 0.01
TPM1-219ENST00000559397 MRPL2Q5T653 305 aaKnown RBP15.14■□□□□ 0.01
TPM1-219ENST00000559397 DESI1Q6ICB0 168 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms