RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
RPL28-206ENST00000558752 BTNL2Q9UIR0 455 aa13.73□□□□□ -0.21
RPL28-206ENST00000558752 GPR45Q9Y5Y3 372 aa13.73□□□□□ -0.21
RPL28-206ENST00000558752 JMJD1CQ15652 2540 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 HIVEP2P31629 2446 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 HMGB1P1B2RPK0 211 aaPredicted RBP13.72□□□□□ -0.21
RPL28-206ENST00000558752 SMAD7O15105 426 aaKnown RBP13.72□□□□□ -0.21
RPL28-206ENST00000558752 TGM6O95932 706 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 IL6P05231 212 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 KITP10721 976 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 PCSK6P29122 969 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 EPHA3P29320 983 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 UGT2B10P36537 528 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 MAGEA8P43361 318 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
RPL28-206ENST00000558752 STX5Q13190 355 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 KLHL26Q53HC5 615 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 DCST2Q5T1A1 773 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 CDS1Q92903 461 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 OR7D2Q96RA2 312 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 RTN4RQ9BZR6 473 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 PROCRQ9UNN8 238 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 MED12Q93074 2177 aa13.72□□□□□ -0.21
RPL28-206ENST00000558752 FN1P02751 2386 aaKnown RBP13.72□□□□□ -0.21
RPL28-206ENST00000558752 RNF103-CHMP3A0A140T963 221 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 C7orf72A4D263 438 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 DEFB108AA8MXU0 73 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 B4DXG7 233 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 TNFRSF21O75509 655 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 PGRP06401 933 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 CD8BP10966 210 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 FCGR2AP12318 317 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 PPP3CBP16298 524 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 ZNF17P17021 662 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 SOAT1P35610 550 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 EIF1P41567 113 aaKnown RBP13.71□□□□□ -0.21
RPL28-206ENST00000558752 ANXA11P50995 505 aaKnown RBP13.71□□□□□ -0.21
RPL28-206ENST00000558752 PHC1P78364 1004 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 TMEM44Q2T9K0 475 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 ARHGAP11BQ3KRB8 267 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 NXNQ6DKJ4 435 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 PLEKHM3Q6ZWE6 761 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 UBQLNLQ8IYU4 475 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 CLECL1Q8IZS7 167 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 B4GALNT2Q8NHY0 566 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 FBXO30Q8TB52 745 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 LRRC8CQ8TDW0 803 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 PERPQ96FX8 193 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 C7orf26Q96N11 449 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 SDF2Q99470 211 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 GSX2Q9BZM3 304 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 WDR55Q9H6Y2 383 aaPredicted RBP13.71□□□□□ -0.21
RPL28-206ENST00000558752 POLE3Q9NRF9 147 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 PAQR5Q9NXK6 330 aaPredicted RBP13.71□□□□□ -0.21
RPL28-206ENST00000558752 MARCOQ9UEW3 520 aaPredicted RBP13.71□□□□□ -0.21
RPL28-206ENST00000558752 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.21
RPL28-206ENST00000558752 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 GTPBP1O00178 669 aaKnown RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 STX11O75558 287 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 SLC22A3O75751 556 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 CPSF4O95639 269 aaKnown RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 ALDOCP09972 364 aaKnown RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 H2AFXP16104 143 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 ADH6P28332 368 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 SUMO3P55854 103 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 UFM1P61960 85 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 IRX1P78414 480 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 CCNJQ5T5M9 372 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 VWA1Q6PCB0 445 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 BTLAQ7Z6A9 289 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 ZAR1Q86SH2 424 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 GTPBP8Q8N3Z3 284 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 OR5AK3PQ8NH89 298 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 SPATA3Q8NHX4 192 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 TMEM171Q8WVE6 324 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 NANOS1Q8WY41 292 aaKnown RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 NEURL3Q96EH8 262 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 SLC35G5Q96KT7 338 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 OR52E6Q96RD3 313 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 CXorf56Q9H5V9 222 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 DTNAQ9Y4J8 743 aa13.7□□□□□ -0.22
RPL28-206ENST00000558752 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
RPL28-206ENST00000558752 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
RPL28-206ENST00000558752 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
RPL28-206ENST00000558752 NPIPB9F8W1W9 429 aa13.69□□□□□ -0.22
RPL28-206ENST00000558752 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
RPL28-206ENST00000558752 ZNF195O14628 629 aa13.69□□□□□ -0.22
RPL28-206ENST00000558752 UBDO15205 165 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms