RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CNIH4Q9P003 139 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 TBC1D7Q9P0N9 293 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 ZNF624Q9P2J8 865 aaPredicted RBP5.01□□□□□ -1.61
RTF1-204ENST00000558117 RHCGQ9UBD6 479 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 ZNF148Q9UQR1 794 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 MFHAS1Q9Y4C4 1052 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
RTF1-204ENST00000558117 ANXA2P2A6NMY6 339 aa5□□□□□ -1.61
RTF1-204ENST00000558117 USP27XA6NNY8 438 aa5□□□□□ -1.61
RTF1-204ENST00000558117 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
RTF1-204ENST00000558117 BLOC1S5-TXNDC5H3BN57 136 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TTI1O43156 1089 aa5□□□□□ -1.61
RTF1-204ENST00000558117 ZNF749O43361 778 aa5□□□□□ -1.61
RTF1-204ENST00000558117 HEXBP07686 556 aa5□□□□□ -1.61
RTF1-204ENST00000558117 RPS2P15880 293 aaKnown RBP5□□□□□ -1.61
RTF1-204ENST00000558117 CYP2A7P20853 494 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TEAD1P28347 426 aa5□□□□□ -1.61
RTF1-204ENST00000558117 NR2C2P49116 596 aa5□□□□□ -1.61
RTF1-204ENST00000558117 ATP12AP54707 1039 aa5□□□□□ -1.61
RTF1-204ENST00000558117 SLC8A3P57103 927 aa5□□□□□ -1.61
RTF1-204ENST00000558117 PNRC1Q12796 327 aaPredicted RBP5□□□□□ -1.61
RTF1-204ENST00000558117 NPRL3Q12980 569 aa5□□□□□ -1.61
RTF1-204ENST00000558117 PLA2G7Q13093 441 aa5□□□□□ -1.61
RTF1-204ENST00000558117 VEZF1Q14119 521 aa5□□□□□ -1.61
RTF1-204ENST00000558117 FBXL19-AS1Q494R0 122 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TMEM270Q6UE05 265 aa5□□□□□ -1.61
RTF1-204ENST00000558117 KDELC1Q6UW63 502 aa5□□□□□ -1.61
RTF1-204ENST00000558117 RBMS3Q6XE24 437 aaKnown RBP5□□□□□ -1.61
RTF1-204ENST00000558117 IL17RELQ6ZVW7 336 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TRPT1Q86TN4 253 aaKnown RBP5□□□□□ -1.61
RTF1-204ENST00000558117 ZNF683Q8IZ20 524 aa5□□□□□ -1.61
RTF1-204ENST00000558117 SLC4A11Q8NBS3 891 aa5□□□□□ -1.61
RTF1-204ENST00000558117 OR10Q1Q8NGQ4 319 aa5□□□□□ -1.61
RTF1-204ENST00000558117 FAM76AQ8TAV0 307 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TAS1R2Q8TE23 839 aa5□□□□□ -1.61
RTF1-204ENST00000558117 TEKT4Q8WW24 435 aa5□□□□□ -1.61
RTF1-204ENST00000558117 RNASE6Q93091 150 aaKnown RBP5□□□□□ -1.61
RTF1-204ENST00000558117 SENP5Q96HI0 755 aaPredicted RBP5□□□□□ -1.61
RTF1-204ENST00000558117 ZNF396Q96N95 335 aaPredicted RBP5□□□□□ -1.61
RTF1-204ENST00000558117 INTS14Q96SY0 518 aa5□□□□□ -1.61
RTF1-204ENST00000558117 ABHD6Q9BV23 337 aa5□□□□□ -1.61
RTF1-204ENST00000558117 HES7Q9BYE0 225 aa5□□□□□ -1.61
RTF1-204ENST00000558117 CYP3A43Q9HB55 503 aa5□□□□□ -1.61
RTF1-204ENST00000558117 FETUBQ9UGM5 382 aa5□□□□□ -1.61
RTF1-204ENST00000558117 GNPTGQ9UJJ9 305 aa5□□□□□ -1.61
RTF1-204ENST00000558117 KCNK6Q9Y257 313 aa5□□□□□ -1.61
RTF1-204ENST00000558117 PHF3Q92576 2039 aaKnown RBP5□□□□□ -1.61
RTF1-204ENST00000558117 RNF103-CHMP3A0A140T963 221 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 CXorf51AA0A1B0GTR3 108 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ILVBLA1L0T0 632 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 HTR3EA5X5Y0 456 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 TMEM150CB9EJG8 249 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 VEGFDO43915 354 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 PIGNO95427 931 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 TRUB2O95900 331 aaKnown RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 HPP00738 406 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 CGAP01215 116 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 CCNA2P20248 432 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 IGFBP5P24593 272 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 LUMP51884 338 aaPredicted RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 ADARP55265 1226 aaKnown RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 HILS1P60008 231 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 STX1BP61266 288 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ACTG1P63261 375 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 LRRC74AQ0VAA2 488 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 BST2Q10589 180 aaKnown RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 SQLEQ14534 574 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 GOLGA7BQ2TAP0 167 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ZNF876PQ49A33 203 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 C1orf189Q5VU69 101 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ZER1Q7Z7L7 766 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 AMER3Q8N944 861 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 WDSUB1Q8N9V3 476 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 RELL2Q8NC24 303 aaPredicted RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 OR2T12Q8NG77 320 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 FBXO30Q8TB52 745 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 LYSTQ99698 3801 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 TTYH2Q9BSA4 534 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 BARHL1Q9BZE3 327 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 SLC5A7Q9GZV3 580 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 POPDC2Q9HBU9 364 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ZNF160Q9HCG1 818 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 SLC40A1Q9NP59 571 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 HAO2Q9NYQ3 351 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 ARMCX3Q9UH62 379 aaPredicted RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 SLC12A6Q9UHW9 1150 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 TSPAN16Q9UKR8 245 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 SPIN1Q9Y657 262 aaPredicted RBP4.99□□□□□ -1.61
RTF1-204ENST00000558117 AP1M2Q9Y6Q5 423 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 MED12Q93074 2177 aa4.99□□□□□ -1.61
RTF1-204ENST00000558117 DNAH9Q9NYC9 4486 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 DSCAMO60469 2012 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 A0A096LNT2 108 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 ELOVL7A1L3X0 281 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 LRRIQ3A6PVS8 624 aaPredicted RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 SLC22A2O15244 555 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 SSX4O60224 188 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 BCL10O95999 233 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 SOD1P00441 154 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms