RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 IRGMA1A4Y4 181 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 ADH1BP00325 375 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 CPMP14384 443 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 EVI2BP34910 448 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 KIR2DL1P43626 348 aaPredicted RBP11.95□□□□□ -0.5
LDLR-207ENST00000558013 LSSP48449 732 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 PPP1CAP62136 330 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 SLC25A35Q3KQZ1 300 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 PRRT3Q5FWE3 981 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 YAF2Q8IY57 180 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 OR4M1Q8NGD0 313 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 OR52N1Q8NH53 320 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 MYADMQ96S97 322 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 RBCK1Q9BYM8 510 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 DUXAA6NLW8 204 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 C5orf67F2Z3F1 127 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 J3QLW9 94 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 IMPA2O14732 288 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 LINC01565O15544 149 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 SLC35G6P0C7Q6 338 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 ZNF19P17023 458 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 DCST2Q5T1A1 773 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
LDLR-207ENST00000558013 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 TRILQ7L0X0 811 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 MEPCEQ7L2J0 689 aaKnown RBP11.95□□□□□ -0.5
LDLR-207ENST00000558013 SAMD12Q8N8I0 201 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 PEX11GQ96HA9 241 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 OR2M4Q96R27 311 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 HDHD2Q9H0R4 259 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 WSB2Q9NYS7 404 aaPredicted RBP11.95□□□□□ -0.5
LDLR-207ENST00000558013 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 RASD1Q9Y272 281 aa11.95□□□□□ -0.5
LDLR-207ENST00000558013 OR6C74A6NCV1 312 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 LRRN3E7EW58 273 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 PRKNO60260 465 aaPredicted RBP11.94□□□□□ -0.5
LDLR-207ENST00000558013 LYPD3O95274 346 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 NT5EP21589 574 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 FOXK2Q01167 660 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 ZNF776Q68DI1 518 aaPredicted RBP11.94□□□□□ -0.5
LDLR-207ENST00000558013 ESPNLQ6ZVH7 1005 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 OR4N2Q8NGD1 307 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 OR5W2Q8NH69 310 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 HS6ST2Q96MM7 605 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 CD180Q99467 661 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 TEAD3Q99594 435 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 KCNJ15Q99712 375 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 LRRN3Q9H3W5 708 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 ANKRD19PQ9H560 264 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 KIR3DX1Q9H7L2 352 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 KLHL1Q9NR64 748 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 OR6C2Q9NZP2 312 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 COLEC10Q9Y6Z7 277 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 BRWD1Q9NSI6 2320 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 TRAPPC13A5PLN9 417 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
LDLR-207ENST00000558013 RASGRP1O95267 797 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 SHC2P98077 582 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 RGS1Q08116 209 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 DUSP8Q13202 625 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 ENPP2Q13822 863 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 CRMP1Q14194 572 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 ZNF542PQ5EBM4 170 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
LDLR-207ENST00000558013 ORAI1Q96D31 301 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 BPIFA2Q96DR5 249 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 C4orf36Q96KX1 117 aa11.94□□□□□ -0.5
LDLR-207ENST00000558013 LYARQ9NX58 379 aaKnown RBP11.94□□□□□ -0.5
LDLR-207ENST00000558013 CHST10O43529 356 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 SCO2O43819 266 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 PPP1R3DO95685 299 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 NGFRP08138 427 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 UGT2B7P16662 529 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 GABRA3P34903 492 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
LDLR-207ENST00000558013 INPP1P49441 399 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 GALK2Q01415 458 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 GXYLT1Q4G148 440 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 GJD3Q8N144 294 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 COX18Q8N8Q8 333 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 OR5J2Q8NH18 312 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 KIAA1143Q96AT1 154 aaPredicted RBP11.93□□□□□ -0.5
LDLR-207ENST00000558013 TNFRSF13CQ96RJ3 184 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 ABHD1Q96SE0 405 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 TEX12Q9BXU0 123 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 ZNF350Q9GZX5 532 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 ENAMQ9NRM1 1142 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 CDHR4A6H8M9 788 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 RGS9O75916 674 aaPredicted RBP11.93□□□□□ -0.5
LDLR-207ENST00000558013 HMGN1P05114 100 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 PRKAR1AP10644 381 aa11.93□□□□□ -0.5
LDLR-207ENST00000558013 LAMP2P13473 410 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms