RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SPHK1Q9NYA1 384 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 EIF3KQ9UBQ5 218 aaKnown RBP10.58□□□□□ -0.72
SRP54-213ENST00000556994 KCNN3Q9UGI6 736 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 WDR45Q9Y484 360 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZNF780BQ9Y6R6 833 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 BHLHE40O14503 412 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PCDH8O95206 1070 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 MPC2O95563 127 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 MT-ND5P03915 603 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 TPOP07202 933 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 CEBPBP17676 345 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 BMP7P18075 431 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GALP22466 123 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PYCR1P32322 319 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PPM1AP35813 382 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZNF136P52737 540 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 VSX2P58304 361 aaPredicted RBP10.58□□□□□ -0.72
SRP54-213ENST00000556994 BTN3A2P78410 334 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 BDH1Q02338 343 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZNF234Q14588 700 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 MAPK14Q16539 360 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 TMEM35AQ53FP2 167 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PRAMEF8Q5VWM4 474 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 PRAMEF7Q5VXH5 474 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 SSX6Q7RTT6 188 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 ADGRD2Q7Z7M1 963 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 LUZP2Q86TE4 346 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 RFLNBQ8N5W9 214 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 KCT2Q8NC54 265 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 OR2L5Q8NG80 312 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 OR5J2Q8NH18 312 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 CEP76Q8TAP6 659 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GIMAP1Q8WWP7 306 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 GCDHQ92947 438 aaPredicted RBP10.58□□□□□ -0.72
SRP54-213ENST00000556994 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 NDC1Q9BTX1 674 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 IFT27Q9BW83 186 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 NUBP2Q9Y5Y2 271 aa10.58□□□□□ -0.72
SRP54-213ENST00000556994 VCANP13611 3396 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 TRAV27A0A087WT01 109 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CDHR4A6H8M9 788 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 LINC00862A6NCI5 91 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PLPP2O43688 288 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 SSNA1O43805 119 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR5F1O95221 314 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CFDP00746 253 aaPredicted RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 WNT1P04628 370 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 HTR2AP28223 471 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 RAB28P51157 221 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ERVK-21P61565 698 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CAMK2DQ13557 499 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 EXOSC2Q13868 293 aaKnown RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 ELAVL3Q14576 367 aaKnown RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 GSG1Q2KHT4 349 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 SHISA5Q8N114 240 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ARL14Q8N4G2 192 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR52L1Q8NGH7 329 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR13C2Q8NGS9 318 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR51A7Q8NH64 312 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 THAP4Q8WY91 577 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 NR4A3Q92570 626 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 GHSRQ92847 366 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 MOAP1Q96BY2 351 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 RSPRY1Q96DX4 576 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 MSANTD3Q96H12 275 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 HS6ST2Q96MM7 605 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CD180Q99467 661 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 JAM3Q9BX67 310 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PITHD1Q9GZP4 211 aaPredicted RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 SYNDIG1Q9H7V2 258 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ERVMER34-1Q9H9K5 563 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 BRD7Q9NPI1 651 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 FBXO34Q9NWN3 711 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CALML5Q9NZT1 146 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 FLVCR2Q9UPI3 526 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 EDDM13A0A1B0GTR0 161 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PRR23D1E9PI22 279 aaPredicted RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 GPR171O14626 319 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 HPXP02790 462 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ASGR2P07307 311 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PRR23D2P0DMB1 279 aaPredicted RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 CSF2RAP15509 400 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ATF1P18846 271 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 RAB3BP20337 219 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 DNASE1P24855 282 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ITGB8P26012 769 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 DDX6P26196 483 aaKnown RBP eCLIP10.57□□□□□ -0.72
SRP54-213ENST00000556994 FOXK2Q01167 660 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ZNF85Q03923 595 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CRYZQ08257 329 aaKnown RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 SNTA1Q13424 505 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 DUSP5Q16690 384 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 SFRP4Q6FHJ7 346 aaPredicted RBP10.57□□□□□ -0.72
SRP54-213ENST00000556994 ADAMTSL4Q6UY14 1074 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 SLC39A5Q6ZMH5 540 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms