RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SNAP47Q5SQN1 464 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 KIRREL2Q6UWL6 708 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CXXC5Q7LFL8 322 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PARP16Q8N5Y8 322 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TMEM99Q8N816 258 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 BCORP1Q8N888 145 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CADM4Q8NFZ8 388 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TSLPQ969D9 159 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 NACC2Q96BF6 587 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CD180Q99467 661 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TM9SF2Q99805 663 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF559Q9BR84 538 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PRRG3Q9BZD7 231 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OR10A5Q9H207 317 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SMURF1Q9HCE7 757 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PDE7BQ9NP56 450 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 KRCC1Q9NPI7 259 aaPredicted RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TXNL4BQ9NX01 149 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 MRPS33Q9Y291 106 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 EXOSC1Q9Y3B2 195 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SF3B6Q9Y3B4 125 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 A3GALT2U3KPV4 340 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SPAG17Q6Q759 2223 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM129A0AVI4 362 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF670-ZNF695F2Z2N8 137 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 OIP5O43482 229 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 PRAMEF2O60811 474 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 PPP1R3DO95685 299 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 TSPAN19P0C672 248 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 SAGP10523 405 aaPredicted RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 TGM1P22735 817 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 HTR1FP30939 366 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 MXD1Q05195 221 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 FGFBP1Q14512 234 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 NIPAL3Q6P499 406 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF613Q6PF04 617 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 LYSMD2Q8IV50 215 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 CADM2Q8N3J6 435 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF615Q8N8J6 731 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 Q8N9G6 341 aaPredicted RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 GATSQ8NAP1 163 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 OR51G2Q8NGK0 314 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 OR4C3Q8NH37 302 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 KISS1RQ969F8 398 aaPredicted RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 EFHD2Q96C19 240 aaPredicted RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 IFT27Q9BW83 186 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 YIPF2Q9BWQ6 316 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM27Q9HBJ8 222 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 LANCL2Q9NS86 450 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 DHCR7Q9UBM7 475 aaKnown RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 CFL2Q9Y281 166 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 SIGLEC7Q9Y286 467 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 EXOGQ9Y2C4 368 aaKnown RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 MRPS17Q9Y2R5 130 aaKnown RBP9.33□□□□□ -0.92
TMEM260-211ENST00000556648 MED31Q9Y3C7 131 aa9.33□□□□□ -0.92
TMEM260-211ENST00000556648 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CCDC182A6NF36 153 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM150CB9EJG8 249 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 H3BMH7 237 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CLDN4O14493 209 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF749O43361 778 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CHP2O43745 196 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CBFA2T3O75081 653 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 UPK1BO75841 260 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CLUP10909 449 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 PSMA1P25786 263 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 NOS3P29474 1203 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SOX6P35712 828 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CTBP2P56545 445 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 HNRNPKP61978 463 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 FABP5Q01469 135 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 FUT7Q11130 342 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 FHL1Q13642 323 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 INSL4Q14641 139 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF141Q15928 474 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 NXNL2Q5VZ03 156 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 STEAP3Q658P3 488 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TTLL10Q6ZVT0 673 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TMPRSS11FQ6ZWK6 438 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 GATAD2AQ86YP4 633 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 RNF113BQ8IZP6 322 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 OR52L1Q8NGH7 329 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SMAP2Q8WU79 429 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SPRYD4Q8WW59 207 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 HLA-CQ95604 372 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TBX5Q99593 518 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 KLHDC3Q9BQ90 382 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ISG20L2Q9H9L3 353 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TBC1D17Q9HA65 648 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 MCCC2Q9HCC0 563 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 Q9N2J8 555 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 PNO1Q9NRX1 252 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CUTCQ9NTM9 273 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms