RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SHC1P29353 583 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 TTKP33981 857 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 GPC1P35052 558 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 OR3A2P47893 321 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 PRIM2P49643 509 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 PRKAG1P54619 331 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-221ENST00000556571 RAB35Q15286 201 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 STK11Q15831 433 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 IMPG1Q17R60 797 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 TMEM176BQ3YBM2 270 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-221ENST00000556571 TIMM23BQ5SRD1 257 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 TIFABQ6ZNK6 161 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 Q6ZSR9 355 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF551Q7Z340 670 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-221ENST00000556571 SLC22A9Q8IVM8 553 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 ACMSDQ8TDX5 336 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 KCNA7Q96RP8 456 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 CACNG6Q9BXT2 260 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 BCO1Q9HAY6 547 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 CBLN4Q9NTU7 201 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 KLHL9Q9P2J3 617 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 MGAT4BQ9UQ53 548 aa10.52□□□□□ -0.73
ACTN1-221ENST00000556571 POLR3HQ9Y535 204 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-221ENST00000556571 GOLGA8QA0A0J9YX86 632 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GOLGA8OA6NCC3 632 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GOLGA8NF8WBI6 632 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GOLGA8RI6L899 631 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 UBFD1O14562 309 aaKnown RBP10.51□□□□□ -0.73
ACTN1-221ENST00000556571 RGS14O43566 566 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 EFNA2O43921 213 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 LYZL6O75951 148 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 HSPA4LO95757 839 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GGT1P19440 569 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 ENPP1P22413 925 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GCAP28676 217 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 SERPINB4P48594 390 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 PRKAA2P54646 552 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 RAC3P60763 192 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 VSNL1P62760 191 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 FOXF1Q12946 379 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 HSPB3Q12988 150 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 C11orf71Q6IPW1 123 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 NOXRED1Q6NXP6 359 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 EMBQ6PCB8 327 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 TMEM108Q6UXF1 575 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 MTERF4Q7Z6M4 381 aaKnown RBP10.51□□□□□ -0.73
ACTN1-221ENST00000556571 SLC16A11Q8NCK7 471 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 NUP43Q8NFH3 380 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 FBXO27Q8NI29 283 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 FAM168AQ92567 244 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 PROX1Q92786 737 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 L3HYPDHQ96EM0 354 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 DHRS9Q9BPW9 319 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 KLHDC3Q9BQ90 382 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 TMEM216Q9P0N5 145 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 NTMQ9P121 344 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.51□□□□□ -0.732e-6■■■□□ 15.7
ACTN1-221ENST00000556571 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GPC6Q9Y625 555 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-221ENST00000556571 V9GYY5 206 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-221ENST00000556571 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 E7EQL1 145 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 PDPK1O15530 556 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 LMX1BO60663 402 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 PGM3O95394 542 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 NUDT14O95848 222 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 SHBGP04278 402 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ALOX5P09917 674 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ACP2P11117 423 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 SRD5A1P18405 259 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 PTAFRP25105 342 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 CD226Q15762 336 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 DUSP5Q16690 384 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ARL13AQ5H913 290 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 WDR93Q6P2C0 686 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZCCHC12Q6PEW1 402 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 TRIM46Q7Z4K8 759 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZAR1Q86SH2 424 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 MUC15Q8N387 334 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF525Q8N782 197 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 COX18Q8N8Q8 333 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 OR2W6PQ8NHA6 318 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZFP28Q8NHY6 868 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 FBXO30Q8TB52 745 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZFP90Q8TF47 636 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 GIMAP5Q96F15 307 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 ZNF764Q96H86 408 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 METTL2AQ96IZ6 378 aaKnown RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 MS4A4EQ96PG1 132 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 PSD2Q9BQI7 771 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 CXorf36Q9H7Y0 433 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 COQ10BQ9H8M1 238 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 MID1IP1Q9NPA3 183 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-221ENST00000556571 NPAP1Q9NZP6 1156 aa10.5□□□□□ -0.73
ACTN1-221ENST00000556571 DCDC2Q9UHG0 476 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms