RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 IGFBP3P17936 291 aaPredicted RBP1.79□□□□□ -2.12
SNX6-204ENST00000555541 COX7A1P24310 79 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 EPHX2P34913 555 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 PRPS1P60891 318 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 SLAQ13239 276 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 ARFRP1Q13795 201 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 RABGAP1LQ5R372 815 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 LRRC70Q7Z2Q7 622 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 CNTN4Q8IWV2 1026 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 ZNF596Q8TC21 504 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 FAM151AQ8WW52 585 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 SLC5A11Q8WWX8 675 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 ATP6V0A1Q93050 837 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 SPATA13Q96N96 652 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 POLR3FQ9H1D9 316 aaPredicted RBP1.79□□□□□ -2.12
SNX6-204ENST00000555541 UTP6Q9NYH9 597 aaKnown RBP1.79□□□□□ -2.12
SNX6-204ENST00000555541 CYP39A1Q9NYL5 469 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 MTRF1LQ9UGC7 380 aaKnown RBP1.79□□□□□ -2.12
SNX6-204ENST00000555541 CRLS1Q9UJA2 301 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 TDRKHQ9Y2W6 561 aaKnown RBP1.79□□□□□ -2.12
SNX6-204ENST00000555541 PLLPQ9Y342 182 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 UGT2A1Q9Y4X1 527 aa1.79□□□□□ -2.12
SNX6-204ENST00000555541 DOCK9Q9BZ29 2069 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 GFYI3L273 518 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 AIREO43918 545 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 SLC25A27O95847 323 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 SERPINA2P20848 420 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 NMT1P30419 496 aaKnown RBP1.78□□□□□ -2.12
SNX6-204ENST00000555541 PRDX2P32119 198 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 RPS9P46781 194 aaKnown RBP1.78□□□□□ -2.12
SNX6-204ENST00000555541 TFPI2P48307 235 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 MNAT1P51948 309 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 WASHC5Q12768 1159 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 ATF7IP2Q5U623 682 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 COX15Q7KZN9 410 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 ARCQ7LC44 396 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 MTURNQ8N3F0 131 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 DUSP18Q8NEJ0 188 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 SLC22A8Q8TCC7 542 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 CHCHD10Q8WYQ3 142 aaPredicted RBP1.78□□□□□ -2.12
SNX6-204ENST00000555541 SNX21Q969T3 373 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 UPRTQ96BW1 309 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 CITED1Q99966 193 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 NRIP2Q9BQI9 281 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 PELOQ9BRX2 385 aaKnown RBP1.78□□□□□ -2.12
SNX6-204ENST00000555541 C1orf123Q9NWV4 160 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 CYTH4Q9UIA0 394 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 XPO7Q9UIA9 1087 aaKnown RBP1.78□□□□□ -2.12
SNX6-204ENST00000555541 ANGPTL2Q9UKU9 493 aa1.78□□□□□ -2.12
SNX6-204ENST00000555541 TTC21BQ7Z4L5 1316 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 A0A1B0GWB2 263 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 WASHC1A8K0Z3 465 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 KINO60870 393 aaKnown RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 STX11O75558 287 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 IGLV3-19P01714 112 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 PCCBP05166 539 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 HMOX1P09601 288 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 GSTT2P0CG29 244 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 GSTT2BP0CG30 244 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 PDHBP11177 359 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 ATP5A1P25705 553 aaKnown RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 ADSSP30520 456 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 SH3BGRP55822 239 aaPredicted RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 ARF5P84085 180 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 BDH1Q02338 343 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 SLC10A7Q0GE19 358 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 OR52W1Q6IF63 320 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 SCYL2Q6P3W7 929 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 RNF182Q8N6D2 247 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 EXOC6Q8TAG9 804 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 TMEM158Q8WZ71 300 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 CYP2S1Q96SQ9 504 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 RASL11BQ9BPW5 248 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 AIG1Q9NVV5 245 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 CWC25Q9NXE8 425 aaPredicted RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 P2RX2Q9UBL9 471 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 NUFIP1Q9UHK0 495 aaKnown RBP1.77□□□□□ -2.13
SNX6-204ENST00000555541 DNPEPQ9ULA0 475 aa1.77□□□□□ -2.13
SNX6-204ENST00000555541 RNF222A6NCQ9 220 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 VEGFDO43915 354 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 OR10H3O60404 316 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 RETP07949 1114 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 ANXA4P09525 319 aaPredicted RBP1.76□□□□□ -2.13
SNX6-204ENST00000555541 ALPPL2P10696 532 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 CRISP2P16562 243 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 OTX2P32243 289 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 MTTPP55157 894 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 ACTA1P68133 377 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 FUT7Q11130 342 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 SNX1Q13596 522 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 LINC00483Q53H64 154 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 KPRPQ5T749 579 aaPredicted RBP1.76□□□□□ -2.13
SNX6-204ENST00000555541 LIPNQ5VXI9 398 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 ZNF695Q8IW36 515 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 PNKDQ8N490 385 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 NKAPP1Q8N9T2 125 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 STKLD1Q8NE28 680 aa1.76□□□□□ -2.13
SNX6-204ENST00000555541 ANKRD20A12PQ8NF67 263 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms