RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 PKNOX1P55347 436 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 HNRNPH2P55795 449 aaKnown RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 DNAJB13P59910 316 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PHEXP78562 749 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 HSF1Q00613 529 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 SLC18A2Q05940 514 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 STX4Q12846 297 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 LCP2Q13094 533 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ART3Q13508 389 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CEBPEQ15744 281 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF791Q3KP31 576 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 GXYLT1Q4G148 440 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 UNC50Q53HI1 259 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 MFSD4BQ5TF39 518 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 LIPMQ5VYY2 423 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 MTFR2Q6P444 385 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TMEM81Q6P7N7 255 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 XKRXQ6PP77 449 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF788Q6ZQV5 615 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PAGE2Q7Z2X7 111 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 GALNTL5Q7Z4T8 443 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 NUDT13Q86X67 352 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ADGRG3Q86Y34 549 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 SLC22A9Q8IVM8 553 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 RNF175Q8N4F7 328 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF615Q8N8J6 731 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 GBP7Q8N8V2 638 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 OR7G1Q8NGA0 311 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 OR4F6Q8NGB9 312 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 BCAS4Q8TDM0 211 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PAQR8Q8TEZ7 354 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PHF10Q8WUB8 498 aaKnown RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 NCLNQ969V3 563 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ERP27Q96DN0 273 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CCDC126Q96EE4 140 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PHF21BQ96EK2 531 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CNDP1Q96KN2 507 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ART5Q96L15 291 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF681Q96N22 645 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 SECISBP2Q96T21 854 aaKnown RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 MTERF1Q99551 399 aaKnown RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TREX2Q9BQ50 279 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CCDC77Q9BR77 488 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZDHHC11Q9H8X9 412 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 COPS7BQ9H9Q2 264 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 THAP1Q9NVV9 213 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 NMRK1Q9NWW6 199 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TMEM160Q9NX00 188 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TAS2R7Q9NYW3 318 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 AHSPQ9NZD4 102 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 TMEM216Q9P0N5 145 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CPSF2Q9P2I0 782 aaKnown RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PSMC3IPQ9P2W1 217 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 SEC14L3Q9UDX4 400 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PLEKHB1Q9UF11 243 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF639Q9UID6 485 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 EMCNQ9ULC0 261 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 SNX6Q9UNH7 406 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 STK38LQ9Y2H1 464 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 KLF13Q9Y2Y9 288 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CCL27Q9Y4X3 112 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 ANGPTL3Q9Y5C1 460 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 KLF2Q9Y5W3 355 aaPredicted RBP3.79□□□□□ -1.8
CPSF2-204ENST00000555244 COX11Q9Y6N1 276 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 CLCA3PQ9Y6N3 262 aa3.79□□□□□ -1.8
CPSF2-204ENST00000555244 PKDREJQ9NTG1 2253 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 DNAJC13O75165 2243 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 TRBV11-1A0A0K0K1C0 115 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 C1orf226A1L170 272 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 TMEM247A6NEH6 219 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 WASHC1A8K0Z3 465 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 C17orf105B2RV13 164 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 G3V2L1 256 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 ADAM10O14672 748 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 PGRMC2O15173 223 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 TO15178 435 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 LRRTM2O43300 516 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF500O60304 480 aaPredicted RBP3.78□□□□□ -1.8
CPSF2-204ENST00000555244 PLIN3O60664 434 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF354AO60765 605 aaPredicted RBP3.78□□□□□ -1.8
CPSF2-204ENST00000555244 SLC19A2O60779 497 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 LDB3O75112 727 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 CDH16O75309 829 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 OR2J2O76002 312 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 AIFM1O95831 613 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 PLAUP00749 431 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 HLA-DQA2P01906 255 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 KRT6AP02538 564 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 KRT6BP04259 564 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 ATP1B1P05026 303 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 FGF4P08620 206 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 PCNAP12004 261 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 COX7A2P14406 83 aa3.78□□□□□ -1.8
CPSF2-204ENST00000555244 CD53P19397 219 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms