RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SRFP11831 508 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 GGT2P36268 569 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 LTBRP36941 435 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 ADARB1P78563 741 aaKnown RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 IL18R1Q13478 541 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 PROX2Q3B8N5 592 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CCBE1Q6UXH8 406 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CHCHD4Q8N4Q1 142 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 UFD1Q92890 307 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 NANSQ9NR45 359 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CUTCQ9NTM9 273 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 EXO1Q9UQ84 846 aaKnown RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 RNF215Q9Y6U7 377 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TCF20Q9UGU0 1960 aaKnown RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 DOCK7Q96N67 2140 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 HPRP00739 348 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 UBL4AP11441 157 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CASP3P42574 277 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 FZD2Q14332 565 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 BTBD16Q32M84 506 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TP53I3Q53FA7 332 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 DMRTC1Q5HYR2 192 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZER1Q7Z7L7 766 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CDRT4Q8N9R6 151 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 RHBDD1Q8TEB9 315 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 SENP5Q96HI0 755 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 MED30Q96HR3 178 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 OR2A14Q96R47 310 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CRB3Q9BUF7 120 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 SLC6A5Q9Y345 797 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 IGHV5-51A0A0C4DH38 117 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 A0A1W2PPV9 198 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 FABP12A6NFH5 140 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 NCR1O76036 304 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 PDGFBP01127 241 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 KLK3P07288 261 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 LIPAP38571 399 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 YPEL5P62699 121 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 CBLBQ13191 982 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 SPATS1Q496A3 300 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TRIM61Q5EBN2 209 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 MFSD12Q6NUT3 480 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 LINC00615Q96LM1 132 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TNFRSF13CQ96RJ3 184 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 POLDIP3Q9BY77 421 aaKnown RBP11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 ACOT13Q9NPJ3 140 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 PCDHGA6Q9Y5G7 932 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 PCDHGA10Q9Y5H3 936 aa11.37□□□□□ -0.59
ARHGEF40-206ENST00000555232 TSPAN11A1L157 253 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 FAM172BPA6NC97 362 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ANKRD61A6NGH8 418 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 PATE3B3GLJ2 98 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZNF749O43361 778 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 PRKYO43930 277 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 EFEMP2O95967 443 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 SDHBP21912 280 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 CD40LGP29965 261 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 LSSP48449 732 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 KCNJ5P48544 419 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZNF91Q05481 1191 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 PUM1Q14671 1186 aaKnown RBP eCLIP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 AGERQ15109 404 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZNF404Q494X3 552 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 FAM199XQ6PEV8 388 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 UBE3DQ7Z6J8 389 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 FAM83FQ8NEG4 500 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 TSEN15Q8WW01 171 aaKnown RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 BPIFA2Q96DR5 249 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ADAD1Q96M93 576 aaKnown RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 LMF1Q96S06 567 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 OR52D1Q9H346 318 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 SEC14L5O43304 696 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ALOX12BO75342 701 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 SEC14L2O76054 403 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZNF3P17036 446 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 GNALP38405 381 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 DIO2Q92813 273 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ACSS1Q9NUB1 689 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 MRPL15Q9P015 296 aaKnown RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 TMEFF2Q9UIK5 374 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 ZNF443Q9Y2A4 671 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 UNC119BA6NIH7 251 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 GPR89AB7ZAQ6 455 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 SCO1O75880 301 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 GPR89BP0CG08 455 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 MYL9P24844 172 aa11.36□□□□□ -0.59
ARHGEF40-206ENST00000555232 EDNRAP25101 427 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms