RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CCNB1IP1Q9NPC3 277 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 EXOSC3Q9NQT5 275 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 PNO1Q9NRX1 252 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 C20orf141Q9NUB4 165 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 CNOT2Q9NZN8 540 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 CNIH4Q9P003 139 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 SERINC4A6NH21 518 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 PRKNO60260 465 aaPredicted RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 FAM20BO75063 409 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 SYPP08247 313 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 ENDOUP21128 410 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 MST1P26927 711 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 AVPR2P30518 371 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 PSMD4P55036 377 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 CD226Q15762 336 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 NEDD8Q15843 81 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 TCEAL6Q6IPX3 200 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 TMPRSS11FQ6ZWK6 438 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 IQCF1Q8N6M8 205 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 APCDD1LQ8NCL9 501 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 STT3BQ8TCJ2 826 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 BRIX1Q8TDN6 353 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 TCEAL3Q969E4 200 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 C12orf43Q96C57 262 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 NMD3Q96D46 503 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 LCORQ96JN0 433 aaPredicted RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 CDCA4Q9BXL8 241 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 WWTR1Q9GZV5 400 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 C11orf16Q9NQ32 467 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 MRPS18AQ9NVS2 196 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 LSM2Q9Y333 95 aaKnown RBP8.19□□□□□ -1.1
TDP1-210ENST00000554976 PCDHGA5Q9Y5G8 931 aa8.19□□□□□ -1.1
TDP1-210ENST00000554976 HEATR5AQ86XA9 2040 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 KDM4EB2RXH2 506 aaPredicted RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 M0R082 166 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 OIP5O43482 229 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 RGS10O43665 173 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 PTP4A3O75365 173 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 SCRG1O75711 98 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ATE1O95260 518 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 CYC1P08574 325 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ZNF28P17035 718 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 MPLP40238 635 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 RBM34P42696 430 aaKnown RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 GIPRP48546 466 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 TMBIM6P55061 237 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 CDC42P60953 191 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 TBCEQ15813 527 aaPredicted RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 TMEM205Q6UW68 189 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 OVCH1Q7RTY7 1134 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 BPHLQ86WA6 291 aaPredicted RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 NRMQ8IXM6 262 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ZNF540Q8NDQ6 660 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 B3GNT7Q8NFL0 401 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ARSGQ96EG1 525 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 KLHDC3Q9BQ90 382 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 GPR83Q9NYM4 423 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 SELENONQ9NZV5 590 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 PRELID1Q9Y255 219 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ZNF99A8MXY4 864 aaPredicted RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 TMX2-CTNND1H3BSU7 103 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 SURF4O15260 269 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ENTPD6O75354 484 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 IFNA16P05015 189 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 DCAF7P61962 342 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 IL11RAQ14626 422 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 NNATQ16517 81 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 CTF1Q16619 201 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 NDUFAF6Q330K2 333 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 C19orf48Q6RUI8 117 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ANKRD13BQ86YJ7 626 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 PIGXQ8TBF5 258 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 GPN2Q9H9Y4 310 aaPredicted RBP8.18□□□□□ -1.1
TDP1-210ENST00000554976 ENPP5Q9UJA9 477 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 ICAM5Q9UMF0 924 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 UNC13CQ8NB66 2214 aa8.18□□□□□ -1.1
TDP1-210ENST00000554976 A0A1B0GWA3 101 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 SAGE2PA6NJ88 616 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 EFCAB7A8K855 629 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 B4DXG7 233 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 PTGES3LE9PB15 166 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 BHLHE40O14503 412 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 DKK1O94907 266 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 IGF2P01344 180 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 NAT2P11245 290 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 C21orf33P30042 268 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 IDH2P48735 452 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 MC2RQ01718 297 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 NKAIN1Q4KMZ8 207 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 SYT14P1Q58G82 188 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 KIRREL2Q6UWL6 708 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 ZNF730Q6ZMV8 503 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 TMEM239Q8WW34 195 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 EFHD2Q96C19 240 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 LRFN5Q96NI6 719 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms