RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RLIMQ9NVW2 624 aa14.97□□□□□ -0.01
SPTLC2-203ENST00000554901 MED11Q9P086 117 aa14.97□□□□□ -0.01
SPTLC2-203ENST00000554901 SLC7A8Q9UHI5 535 aa14.97□□□□□ -0.01
SPTLC2-203ENST00000554901 SLC9A8Q9Y2E8 581 aa14.97□□□□□ -0.01
SPTLC2-203ENST00000554901 NINQ8N4C6 2090 aa14.96□□□□□ -0.01
SPTLC2-203ENST00000554901 CFAP73A6NFT4 308 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 ACOT8O14734 319 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 TPST1O60507 370 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 PGCP20142 388 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 PPIAP62937 165 aaKnown RBP14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 GLYR1Q49A26 553 aaPredicted RBP14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 OR5M10Q6IEU7 315 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 FAM180AQ6UWF9 173 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 TMEM251Q8N6I4 163 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 GPR32P1Q8NGA4 272 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 C1GALT1C1Q96EU7 318 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 SH3YL1Q96HL8 342 aaPredicted RBP14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 TAAR6Q96RI8 345 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 ARHGDIGQ99819 225 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 RSPO3Q9BXY4 272 aaPredicted RBP14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 ZDHHC11Q9H8X9 412 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 ACKR4Q9NPB9 350 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 FBXL2Q9UKC9 423 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 POMPQ9Y244 141 aa14.96□□□□□ -0.02
SPTLC2-203ENST00000554901 EML6Q6ZMW3 1958 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 TMEM229AB2RXF0 380 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 FAM47E-STBD1D6RA91 191 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 OIP5O43482 229 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 EPPINO95925 133 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 HPNP05981 417 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 GDF1P27539 372 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF41P51814 821 aaPredicted RBP14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 MS4A2Q01362 244 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 ALDH6A1Q02252 535 aaKnown RBP14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 NRF1Q16656 503 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 TMCO5AQ8N6Q1 288 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 LRGUKQ96M69 825 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 TESQ9UGI8 421 aaKnown RBP14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 HRH3Q9Y5N1 445 aa14.95□□□□□ -0.02
SPTLC2-203ENST00000554901 ZFYVE26Q68DK2 2539 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 C7orf72A4D263 438 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 AQP12BA6NM10 295 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 B4DXG7 233 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 ETV2O00321 342 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 TFECO14948 347 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 FMO6PO60774 539 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 BCAS1O75363 584 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 CYP7B1O75881 506 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF682O95780 498 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 NUDT14O95848 222 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 LINGO3P0C6S8 592 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 RFPL3SP0C7P2 107 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 HOXB6P17509 224 aaKnown RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 DPP4P27487 766 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 RNF144AP50876 292 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 DLX5P56178 289 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 RGS8P57771 180 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 PMP22Q01453 160 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 KCNC4Q03721 635 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 EPS8Q12929 822 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 FLOT2Q14254 428 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 SLC10A1Q14973 349 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 NDUFAF6Q330K2 333 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 AQP12AQ8IXF9 295 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 GPR119Q8TDV5 335 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 TMEM234Q8WY98 164 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 ST8SIA1Q92185 356 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 SLC39A7Q92504 469 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 ZBTB8AQ96BR9 441 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 RAB3IPQ96QF0 476 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 BARD1Q99728 777 aaKnown RBP14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 OR2B2Q9GZK3 357 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 AGPAT4Q9NRZ5 378 aa14.94□□□□□ -0.02
SPTLC2-203ENST00000554901 C17orf51A8MQB3 221 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 ADH6P28332 368 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 RFC3P40938 356 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 EIF1P41567 113 aaKnown RBP14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 ACAA2P42765 397 aaKnown RBP14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 MAGEA5P43359 124 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 CCR4P51679 360 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 COPZ1P61923 177 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 NFATC3Q12968 1075 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 IFI44LQ53G44 452 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 KRTCAP3Q53RY4 240 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 SLC25A53Q5H9E4 307 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF324BQ6AW86 544 aaPredicted RBP14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 RANBP3LQ86VV4 465 aaPredicted RBP14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 SPPL2CQ8IUH8 684 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 LSMEM1Q8N8F7 131 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 FAR1Q8WVX9 515 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 GEMIN6Q8WXD5 167 aaKnown RBP14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 PYURFQ96I23 114 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 TPD52L3Q96J77 140 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 MED17Q9NVC6 651 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 LUZP4Q9P127 313 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 DKKL1Q9UK85 242 aa14.93□□□□□ -0.02
SPTLC2-203ENST00000554901 FAM166BA8MTA8 275 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 LINC01387J3KSC0 135 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms