RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SYT5O00445 386 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF264O43296 627 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 SYNGR4O95473 234 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 KRT75O95678 551 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 IL18BPO95998 194 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 CSTAP01040 98 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 UBTFL6P0CB48 400 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 IGFBP2P18065 325 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 EIF1P41567 113 aaKnown RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 KIR2DL3P43628 341 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 IDH3AP50213 366 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 AQP5P55064 265 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 FOXF1Q12946 379 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 PDSS1Q5T2R2 415 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 POMZP3Q6PJE2 187 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 HMGN2P46Q86SG4 172 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ADGRE4PQ86SQ3 457 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 TMEM200AQ86VY9 491 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 KIF18BQ86Y91 864 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ZZZ3Q8IYH5 903 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF619Q8N2I2 560 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 TOR1AIP2Q8NFQ8 470 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 FBXO27Q8NI29 283 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 FNDC9Q8TBE3 224 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 VPS33AQ96AX1 596 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 C14orf79Q96F83 325 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 THOC1Q96FV9 657 aaKnown RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ITCHQ96J02 903 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 LURAP1Q96LR2 239 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 NPAS1Q99742 590 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 KLHDC3Q9BQ90 382 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 RBM24Q9BX46 236 aaKnown RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF350Q9GZX5 532 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 SDR39U1Q9NRG7 319 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 FOXD3Q9UJU5 478 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-213ENST00000554600 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CENPVL1A0A0U1RR11 272 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 FAM234BA2RU67 622 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 HMGN4O00479 90 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TNFSF11O14788 317 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CXCL13O43927 109 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 KIAA0513O60268 411 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 EIF4E2O60573 245 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 UGT2B17O75795 530 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 SASH3O75995 380 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TGDSO95455 350 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 H6PDO95479 791 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 PLGP00747 810 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 C1QCP02747 245 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 NR2F1P10589 423 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 FCGR2AP12318 317 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CPOXP36551 454 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CRATP43155 626 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 SUMO3P55854 103 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 RAC1P63000 192 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CBFBQ13951 182 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TOMM34Q15785 309 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF141Q15928 474 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TMEM44Q2T9K0 475 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 HBMQ6B0K9 141 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TYW3Q6IPR3 259 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 HEPHL1Q6MZM0 1159 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 EIF3MQ7L2H7 374 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 GGNQ86UU5 652 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 LILRA2Q8N149 483 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ANKFN1Q8N957 763 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ACBD4Q8NC06 268 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 OR5W2Q8NH69 310 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 OR10D3Q8NH80 312 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 GPR119Q8TDV5 335 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 CKAP2Q8WWK9 683 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ARSGQ96EG1 525 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 REXO5Q96IC2 774 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 MAGEB18Q96M61 343 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 KLHL15Q96M94 604 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 TREX2Q9BQ50 279 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 EBF4Q9BQW3 602 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 THUMPD3Q9BV44 507 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 PIGMQ9H3S5 423 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 MCCC2Q9HCC0 563 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 POLE3Q9NRF9 147 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 KCNN3Q9UGI6 736 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 KCNE5Q9UJ90 142 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 PACSIN3Q9UKS6 424 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ICAM5Q9UMF0 924 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 L3MBTL1Q9Y468 752 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF175Q9Y473 711 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 GPC6Q9Y625 555 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-213ENST00000554600 ROS1P08922 2347 aa9.59□□□□□ -0.87
SHMT2-213ENST00000554600 HEATR1Q9H583 2144 aaKnown RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 A0A0J9YW62 118 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 C7orf72A4D263 438 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 TUBAL3A6NHL2 446 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 GJE1A6NN92 205 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 NR5A2O00482 541 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CRHP06850 196 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms