RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF197O14709 1029 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 BCL2L11O43521 198 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 TLX2O43763 284 aaPredicted RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 UGDHO60701 494 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 RPP40O75818 363 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 MMP2P08253 660 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 PRKAR2AP13861 404 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 CELP19835 753 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 OPRD1P41143 372 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 HSD11B2P80365 405 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SLC7A9P82251 487 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 ZXDBP98169 803 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 EFNB1P98172 346 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SORDQ00796 357 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 GAB1Q13480 694 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 GINS1Q14691 196 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 TOMM20Q15388 145 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SURF2Q15527 256 aaPredicted RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 SIRPB2Q5JXA9 342 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 LIPNQ5VXI9 398 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 OLFML2AQ68BL7 652 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 RAB12Q6IQ22 244 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SPNS3Q6ZMD2 512 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 ETV3LQ6ZN32 361 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 PRSS45Q7RTY3 260 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 TMEM200AQ86VY9 491 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 CLECL1Q8IZS7 167 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 PRSS35Q8N3Z0 413 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SIDT2Q8NBJ9 832 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 FBXO15Q8NCQ5 510 aaPredicted RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 EEF1AKMT1Q8WVE0 214 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 GEMIN6Q8WXD5 167 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 SORCS1Q8WY21 1168 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 IMP4Q96G21 291 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 PIGQQ9BRB3 760 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 ZNF649Q9BS31 505 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 PINK1Q9BXM7 581 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 SLC39A8Q9C0K1 460 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 FZD8Q9H461 694 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 MRPS30Q9NP92 439 aaKnown RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 MYOZ1Q9NP98 299 aaPredicted RBP8.91□□□□□ -0.98
SIX4-202ENST00000554079 TVP23BQ9NYZ1 205 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 ZMIZ1Q9ULJ6 1067 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 CAMK2AQ9UQM7 478 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 C1orf226A1L170 272 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 PRSS47A8MTI9 375 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 YY2O15391 372 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR8G3PP0DMU2 310 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 C1GALT1C1LP0DN25 315 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TXNP10599 105 aaKnown RBP8.9□□□□□ -0.98
SIX4-202ENST00000554079 EPXP11678 715 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CD79AP11912 226 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 NME1P15531 152 aaKnown RBP8.9□□□□□ -0.98
SIX4-202ENST00000554079 C5AR1P21730 350 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 ACKR3P25106 362 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CCR1P32246 355 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 MAPK9P45984 424 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CDX1P47902 265 aaPredicted RBP8.9□□□□□ -0.98
SIX4-202ENST00000554079 NDUFV1P49821 464 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 ART1P52961 327 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 NRG3P56975 720 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CLN3Q13286 438 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 SMAD4Q13485 552 aaKnown RBP8.9□□□□□ -0.98
SIX4-202ENST00000554079 MPPED2Q15777 294 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 LINC00303Q3SY05 128 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 SMARCD3Q6STE5 483 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CLEC9AQ6UXN8 241 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 SLC36A1Q7Z2H8 476 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 PARGQ86W56 976 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR2L5Q8NG80 312 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR13C4Q8NGS5 318 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR4L1Q8NH43 312 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 CD200R1Q8TD46 325 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 EDEM1Q92611 657 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 ARL11Q969Q4 196 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TGM7Q96PF1 710 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 LAT2Q9GZY6 243 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 ABCG8Q9H221 673 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TMEM231Q9H6L2 316 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 PRDM5Q9NQX1 630 aaPredicted RBP8.9□□□□□ -0.98
SIX4-202ENST00000554079 PARPBPQ9NWS1 579 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 RHCGQ9UBD6 479 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TNFSF13BQ9Y275 285 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 TRPV2Q9Y5S1 764 aa8.9□□□□□ -0.98
SIX4-202ENST00000554079 OR14I1A6ND48 311 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 E7EQ34 232 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 TSTD3H0UI37 97 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 H3BN98 237 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 GOSR2O14653 212 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 FFAR1O14842 300 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 TAPBPO15533 448 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 YIF1AO95070 293 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 CPSF4O95639 269 aaKnown RBP8.9□□□□□ -0.99
SIX4-202ENST00000554079 CRYABP02511 175 aaKnown RBP8.9□□□□□ -0.99
SIX4-202ENST00000554079 CRHP06850 196 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 ADH1AP07327 375 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 SBK2P0C263 348 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms