RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 MYO1HQ8N1T3 1032 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 GPATCH11Q8N954 259 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MCUQ8NE86 351 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TRPV3Q8NET8 790 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MYRIPQ8NFW9 859 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OR4N2Q8NGD1 307 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OR14A16Q8NHC5 309 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 GSDMBQ8TAX9 411 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SLC22A8Q8TCC7 542 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ZPLD1Q8TCW7 415 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CCT6BQ92526 530 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 HTRA1Q92743 480 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ABTB1Q969K4 478 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 C1GALT1C1Q96EU7 318 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PDLIM5Q96HC4 596 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TMEM41AQ96HV5 264 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SGCZQ96LD1 299 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PANX2Q96RD6 677 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SERINC2Q96SA4 455 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 HBEGFQ99075 208 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CCL19Q99731 98 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 AIF1LQ9BQI0 150 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TMEM204Q9BSN7 226 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 HAUS8Q9BT25 410 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 DOHHQ9BU89 302 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ITPAQ9BY32 194 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 REG4Q9BYZ8 158 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TRIM5Q9C035 493 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OR2B2Q9GZK3 357 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 WWTR1Q9GZV5 400 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PCBD2Q9H0N5 130 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 EXO5Q9H790 373 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 NT5DC2Q9H857 520 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CALHM2Q9HA72 323 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SMURF2Q9HAU4 748 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TEX10Q9NXF1 929 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 QPCTLQ9NXS2 382 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 FETUBQ9UGM5 382 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF639Q9UID6 485 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TRMT6Q9UJA5 497 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PTBP2Q9UKA9 531 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CES1P1Q9UKY3 287 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 GUCA1BQ9UMX6 200 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OARD1Q9Y530 152 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CLCA3PQ9Y6N3 262 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MALRD1Q5VYJ5 2156 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 FLNAP21333 2647 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 hCG_2014768A0A024R1R8 64 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 FRG2CA6NGY1 282 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 F8W8V4 182 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 PSMD12O00232 456 aaPredicted RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 DNALI1O14645 258 aaPredicted RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 PHGDHO43175 533 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CD5LO43866 347 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 EFNA2O43921 213 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TSPAN2O60636 221 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 LY6HO94772 140 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 OPN1LWP04000 364 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MLNP12872 115 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CPMP14384 443 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CPN1P15169 458 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 IL11P20809 199 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CPN2P22792 545 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ABCD3P28288 659 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SHC1P29353 583 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TACR3P29371 465 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 GGT5P36269 586 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 UGT2B10P36537 528 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CPOXP36551 454 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CD79BP40259 229 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ELK3P41970 407 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MSH2P43246 934 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 EMDP50402 254 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 NEK2P51955 445 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 AP1S2P56377 157 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 KCNJ2P63252 427 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SIRPAP78324 504 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MRPS25P82663 173 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CDKL1Q00532 357 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 HMGCS1Q01581 520 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TNFRSF17Q02223 184 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 STX4Q12846 297 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CHIT1Q13231 466 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 RPS6KA2Q15349 733 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SPA17Q15506 151 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CLEC12BQ2HXU8 276 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 PRICKLE4Q2TBC4 344 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CTU2Q2VPK5 515 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 KRTAP27-1Q3LI81 207 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TRMT12Q53H54 448 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF628Q5EBL2 1059 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SEL1L2Q5TEA6 688 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 STEAP4Q687X5 459 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 OR4C11Q6IEV9 310 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 HEPHL1Q6MZM0 1159 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MFSD12Q6NUT3 480 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CASC4Q6P4E1 433 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZDHHC24Q6UX98 284 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ANGPTL8Q6UXH0 198 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 APOOLQ6UXV4 268 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms