RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 AQP8O94778 261 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 PLGP00747 810 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-207ENST00000553290 CGAP01215 116 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 GUSBP08236 651 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
ACTN1-207ENST00000553290 UBL4AP11441 157 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 ART1P52961 327 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 IST1P53990 364 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 LRRC74AQ0VAA2 488 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 FOXF1Q12946 379 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 GPR68Q15743 365 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF141Q15928 474 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 FAM174BQ3ZCQ3 159 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 SAXO2Q658L1 398 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 HBMQ6B0K9 141 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 HEPHL1Q6MZM0 1159 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-207ENST00000553290 C16orf62Q7Z3J2 963 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 CLEC4FQ8N1N0 589 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 GPR119Q8TDV5 335 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 XAGE5Q8WWM1 108 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 OIT3Q8WWZ8 545 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 NEURL3Q96EH8 262 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 GMPPAQ96IJ6 420 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-207ENST00000553290 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 KLHL15Q96M94 604 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 CCDC115Q96NT0 180 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 KLHDC3Q9BQ90 382 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 OPN3Q9H1Y3 402 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-207ENST00000553290 MANSC1Q9H8J5 431 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 TIGARQ9NQ88 270 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 BTNL2Q9UIR0 455 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 F8P00451 2351 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 SERINC4A6NH21 518 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 OIP5O43482 229 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 FCMRO60667 390 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 SS18L1O75177 396 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 OPN1LWP04000 364 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 PABPC4LP0CB38 370 aaKnown RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 KITP10721 976 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 POU2F1P14859 743 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 EPHA3P29320 983 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 SFTPDP35247 375 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 CHI3L1P36222 383 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 SLC6A8P48029 635 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 KCNJ5P48544 419 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 KHKP50053 298 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 RNF144AP50876 292 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 CTBP2P56545 445 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 CARD18P57730 90 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 UFM1P61960 85 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 CBFBQ13951 182 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 AP1ARQ63HQ0 302 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TRIML2Q8N7C3 387 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 OR6K3Q8NGY3 331 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 OR5W2Q8NH69 310 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 RFWD2Q8NHY2 731 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 FBXO27Q8NI29 283 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 OSTF1Q92882 214 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 ARL8AQ96BM9 186 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 ARSGQ96EG1 525 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TEX37Q96LM6 180 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 ZBTB18Q99592 522 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 SLC35A5Q9BS91 424 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF350Q9GZX5 532 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 LAT2Q9GZY6 243 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 LIME1Q9H400 295 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 WDR55Q9H6Y2 383 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TMEM185BQ9H7F4 350 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 POLE3Q9NRF9 147 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 PLSCR4Q9NRQ2 329 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 MKLN1Q9UL63 735 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 AKAP6Q13023 2319 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
ACTN1-207ENST00000553290 ABCA4P78363 2273 aa11.61□□□□□ -0.55
ACTN1-207ENST00000553290 GOLGA8QA0A0J9YX86 632 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 GOLGA8OA6NCC3 632 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 GOLGA8NF8WBI6 632 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 ETV2O00321 342 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF195O14628 629 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 EFNA2O43921 213 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 UGT2B17O75795 530 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 NTN1O95631 604 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CSTAP01040 98 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 HRGP04196 525 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 PGRP06401 933 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 OR12D1P0DN82 309 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 PRKCAP17252 672 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 IL11P20809 199 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms