RNA–Protein interactions for RNA: ENST00000552752.5

PFKM-227, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 887 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-227	ENST00000552752	CFAP73	A6NFT4	308 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	PRRG2	O14669	202 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	ADAM10	O14672	748 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	DNAJA2	O60884	412 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	IFNA14	P01570	189 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	IGHG3	P01860	377 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	TPO	P07202	933 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	RPS4Y1	P22090	263 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	SLC6A8	P48029	635 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	SUMO3	P55854	103 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	SKP2	Q13309	424 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	VEZF1	Q14119	521 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	LRRC23	Q53EV4	343 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	SAMD4B	Q5PRF9	694 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	WLS	Q5T9L3	541 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	RINL	Q6ZS11	566 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	ZNF440	Q8IYI8	595 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	CLIP4	Q8N3C7	705 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	RBM15B	Q8NDT2	890 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	ABTB1	Q969K4	478 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	OR2B2	Q9GZK3	357 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	MED17	Q9NVC6	651 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	TMEM181	Q9P2C4	612 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	ICAM5	Q9UMF0	924 aa		13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-227	ENST00000552752	TRGV8	A0A0C4DH27	118 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	CDHR4	A6H8M9	788 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752		B4DXG7	233 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	SHISA8	B8ZZ34	492 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752		H3BML4	177 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	AQP7	O14520	342 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	ZIC3	O60481	467 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	SLC19A2	O60779	497 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	BCAS1	O75363	584 aa	Predicted RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	GKN3P	P0CG01	181 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	T-ENOL	P0DO92	83 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	GP1BB	P13224	206 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	PRKAR1B	P31321	381 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	COPZ1	P61923	177 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	EEF1A1	P68104	462 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	SRY	Q05066	204 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	QPRT	Q15274	297 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	RNF220	Q5VTB9	566 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	POMZP3	Q6PJE2	187 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	ENPP6	Q6UWR7	440 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	ZNF550	Q7Z398	422 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	OR5M9	Q8NGP3	310 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	GPR119	Q8TDV5	335 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	TMEM234	Q8WY98	164 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	SMPDL3B	Q92485	455 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	FAM162A	Q96A26	154 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	ZBTB8A	Q96BR9	441 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	EXOSC3	Q9NQT5	275 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	DNAJB12	Q9NXW2	375 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	GMPR2	Q9P2T1	348 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	SPRR3	Q9UBC9	169 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	STOML1	Q9UBI4	398 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	CAMK2A	Q9UQM7	478 aa		13.14	□□□□□ -0.31
PFKM-227	ENST00000552752	BOD1L1	Q8NFC6	3051 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752		A0A1B0GVC2	190 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	OR14I1	A6ND48	311 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752		J3QKU1	62 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	CXCR6	O00574	342 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	BCKDK	O14874	412 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	GYG2	O15488	501 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	MFN2	O95140	757 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ACTL6A	O96019	429 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PLA2G2A	P14555	144 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	BMP7	P18075	431 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	POU3F2	P20265	443 aa	Predicted RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ME2	P23368	584 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	KDELR2	P33947	212 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	EIF1	P41567	113 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	UQCRFS1	P47985	274 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	IDH2	P48735	452 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	STAR	P49675	285 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PCBP3	P57721	371 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	NCALD	P61601	193 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	DMTN	Q08495	405 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	TOMM34	Q15785	309 aa	Predicted RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PLPPR5	Q32ZL2	321 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	GLYR1	Q49A26	553 aa	Predicted RBP	13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	GXYLT1	Q4G148	440 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ZNF585A	Q6P3V2	769 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	UBQLNL	Q8IYU4	475 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	CADM2	Q8N3J6	435 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	FAM156A	Q8NDB6	213 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ATP6V1C2	Q8NEY4	427 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	RASSF5	Q8WWW0	418 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PROX1	Q92786	737 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	TPD52L3	Q96J77	140 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	RNF145	Q96MT1	663 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PINK1	Q9BXM7	581 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	UGT2B28	Q9BY64	529 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	PLSCR2	Q9NRY7	297 aa		13.13	□□□□□ -0.31
PFKM-227	ENST00000552752	ABCD2	Q9UBJ2	740 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms