RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ATCAYQ86WG3 371 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 MAML2Q8IZL2 1156 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SLC34A3Q8N130 599 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 CYP4Z2PQ8N1L4 340 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 LSMEM1Q8N8F7 131 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 FAM71CQ8NEG0 241 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 OR13C2Q8NGS9 318 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 RNF217Q8TC41 542 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 FANK1Q8TC84 345 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SLC2A12Q8TD20 617 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF721Q8TF20 911 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 HS6ST2Q96MM7 605 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SLC46A1Q96NT5 459 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 PHOX2BQ99453 314 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SH3GL3Q99963 347 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 DUSP23Q9BVJ7 150 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 NUDT9Q9BW91 350 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 NXF5Q9H1B4 397 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 HINT3Q9NQE9 182 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 FGF21Q9NSA1 209 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SIDT1Q9NXL6 827 aaKnown RBP10.6□□□□□ -0.71
RAB5C-208ENST00000551338 OSGIN1Q9UJX0 560 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SIGLEC7Q9Y286 467 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 SDK1Q7Z5N4 2213 aa10.6□□□□□ -0.71
RAB5C-208ENST00000551338 FRG2CA6NGY1 282 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 BHLHE40O14503 412 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 POLR1CO15160 346 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 TOX3O15405 576 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 OIP5O43482 229 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 SIGLEC6O43699 453 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 SLC2A10O95528 541 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 NADKO95544 446 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 IL33O95760 270 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 CSTAP01040 98 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 NGFRP08138 427 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ANKRD34CP0C6C1 535 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ETV5P41161 510 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 RBM34P42696 430 aaKnown RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 PPICP45877 212 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ETV1P50549 477 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 BMXP51813 675 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 CDH11P55287 796 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 CCL7P80098 99 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 DGUOKQ16854 277 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM44Q2T9K0 475 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 HLA-BQ31612 363 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 C3orf38Q5JPI3 329 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 RPL13AP3Q6NVV1 102 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 HSDL2Q6YN16 418 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 THSD4Q6ZMP0 1018 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 PROKR2Q8NFJ6 384 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 OR2T33Q8NG76 320 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 OR4C3Q8NH37 302 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 PIGKQ92643 395 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 BORCS5Q969J3 196 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ADIPOR1Q96A54 375 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 EFHD2Q96C19 240 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 RNF31Q96EP0 1072 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 DTNBP1Q96EV8 351 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 MND1Q9BWT6 205 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 OR8D2Q9GZM6 311 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 RACGAP1Q9H0H5 632 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ENKD1Q9H0I2 346 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 DCSTAMPQ9H295 470 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 UBQLN3Q9H347 655 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 RNF167Q9H6Y7 350 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ZBTB20Q9HC78 741 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-208ENST00000551338 SLC22A11Q9NSA0 550 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 IL20RAQ9UHF4 553 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 ERGIC3Q9Y282 383 aa10.59□□□□□ -0.71
RAB5C-208ENST00000551338 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CPED1A4D0V7 1026 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 EFCAB7A8K855 629 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CCRL2O00421 344 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SOCS6O14544 535 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 MYL12BO14950 172 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 LAMTOR5O43504 91 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 APOL3O95236 402 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 HMGN1P05114 100 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ENDOUP21128 410 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 RORAP35398 523 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CSTF1Q05048 431 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SIGLEC14Q08ET2 396 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 RAB40BQ12829 278 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 MLLT11Q13015 90 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 EBPQ15125 230 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SPHARQ15513 63 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CD226Q15762 336 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ANKDD1AQ495B1 522 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 KLHL26Q53HC5 615 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SOWAHCQ53LP3 525 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms