RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PRPH2P23942 346 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TNFRSF8P28908 595 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CRABP2P29373 138 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 EEF1DP29692 281 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 DCTP40126 519 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 RFC3P40938 356 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 PTGDSP41222 190 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 RASSF2P50749 326 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 HSD17B7P56937 341 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR4D2P58180 307 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TNFRSF17Q02223 184 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF33BQ06732 778 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CKAP4Q07065 602 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TFF3Q07654 80 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 RGS1Q08116 209 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GTF2H2Q13888 395 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 RBBP5Q15291 538 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR1C1Q15619 314 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 NSDHLQ15738 373 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 NDUFA9Q16795 377 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TBRG1Q3YBR2 411 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CMPK2Q5EBM0 449 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 GTF2H2CQ6P1K8 395 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 AAGABQ6PD74 315 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 Q6ZTK2 550 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SLC44A2Q8IWA5 706 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR4N5Q8IXE1 308 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ZCCHC7Q8N3Z6 543 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TEX9Q8N6V9 391 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ATG16L2Q8NAA4 619 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TRPV3Q8NET8 790 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 B3GNT7Q8NFL0 401 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR4F6Q8NGB9 312 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 OR6Y1Q8NGX8 325 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SLC2A12Q8TD20 617 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SSC4DQ8WTU2 575 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CNDP1Q96KN2 507 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF681Q96N22 645 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 RASL10BQ96S79 203 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 SERINC2Q96SA4 455 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 MTERF1Q99551 399 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 TREX2Q9BQ50 279 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 KLHDC3Q9BQ90 382 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 EFCAB11Q9BUY7 163 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 NTMT1Q9BV86 223 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 NPLQ9BXD5 320 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 MRPL1Q9BYD6 325 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 FAM129AQ9BZQ8 928 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 DDX31Q9H8H2 851 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 LYRM4Q9HD34 91 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CD274Q9NZQ7 290 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 CPSF2Q9P2I0 782 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 PLEKHB1Q9UF11 243 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF639Q9UID6 485 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ACOT9Q9Y305 439 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 UTP11Q9Y3A2 253 aaKnown RBP4.43□□□□□ -1.7
SCAF11-214ENST00000550893 MMACHCQ9Y4U1 282 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 PTGDR2Q9Y5Y4 395 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ABCA4P78363 2273 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 ACANP16112 2415 aa4.43□□□□□ -1.7
SCAF11-214ENST00000550893 MPDZO75970 2070 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SETD2Q9BYW2 2564 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TRAV17A0A0B4J275 112 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TRBV11-1A0A0K0K1C0 115 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SYT5O00445 386 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CLDN4O14493 209 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PGRMC2O15173 223 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SKAP2O75563 359 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SEMA3DO95025 777 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PSMG1O95456 288 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ALPPP05187 535 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SERPIND1P05546 499 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 RHOXF2BP0C7M4 288 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 HOXB9P17482 250 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 HIST1H2ADP20671 130 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 IL10P22301 178 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 GSTM2P28161 218 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TNFSF8P32971 234 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SERPINF1P36955 418 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SOX3P41225 446 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CA7P43166 264 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PCP4P48539 62 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 MTTPP55157 894 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CDH13P55290 713 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 VSNL1P62760 191 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 AP2B1P63010 937 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 IRF8Q02556 426 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FOLH1Q04609 750 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PCLAFQ15004 111 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 EBPQ15125 230 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 RPS6KA2Q15349 733 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZRSR2Q15696 482 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 INAQ16352 499 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 EXT1Q16394 746 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 C3AR1Q16581 482 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF791Q3KP31 576 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 GALNTL6Q49A17 601 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF766Q5HY98 468 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms