RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
PFDN5-212ENST00000550880 GPC6Q9Y625 555 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-212ENST00000550880 FKBP7Q9Y680 259 aa9.79□□□□□ -0.84
PFDN5-212ENST00000550880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.79□□□□□ -0.842e-7■■■■□ 20.5
PFDN5-212ENST00000550880 PCNX3Q9H6A9 2034 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GOLGA8QA0A0J9YX86 632 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 CIB4A0PJX0 185 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GOLGA8OA6NCC3 632 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GOLGA8NF8WBI6 632 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GOLGA8RI6L899 631 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 NDUFS8O00217 210 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 TCF21O43680 179 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 KCNK2O95069 426 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PGM3O95394 542 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ALOX5P09917 674 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ENPP1P22413 925 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 IGHV1-2P23083 117 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 SHC1P29353 583 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PRIM2P49643 509 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PDLIM4P50479 330 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ZNF83P51522 516 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PKNOX1P55347 436 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GGTLC2Q14390 218 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PRSS53Q2L4Q9 553 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 UNC50Q53HI1 259 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ZNF678Q5SXM1 525 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 GALNT5Q7Z7M9 940 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 UBE2J2Q8N2K1 259 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 RFLNBQ8N5W9 214 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 COX18Q8N8Q8 333 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ZNF527Q8NB42 609 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 NUP43Q8NFH3 380 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PSD2Q9BQI7 771 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 PIMREGQ9BSJ6 248 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 INPP5KQ9BT40 448 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 HOXD1Q9GZZ0 328 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 NPAP1Q9NZP6 1156 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 TIMM22Q9Y584 194 aa9.78□□□□□ -0.84
PFDN5-212ENST00000550880 ALPK2Q86TB3 2170 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 IGHV3-15A0A0B4J1V0 119 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ESYT3A0FGR9 886 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CCT8L1PA6NM43 557 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ZNF724A8MTY0 619 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 C9JVG2 144 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 M0R1B8 84 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 GTPBP1O00178 669 aaKnown RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 PDPK1O15530 556 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CRCPO75575 148 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 APEHP13798 732 aaKnown RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 COX5AP20674 150 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 IMPDH1P20839 514 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ATP6V1C1P21283 382 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CD40P25942 277 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 HTR6P50406 440 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 P2RX1P51575 399 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 SUMO3P55854 103 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CHRNEQ04844 493 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 C2orf54Q08AI8 447 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 LCP2Q13094 533 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 SELENBP1Q13228 472 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ZCCHC12Q6PEW1 402 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ZDHHC24Q6UX98 284 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 C12orf54Q6X4T0 127 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ZNF551Q7Z340 670 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 SLC22A9Q8IVM8 553 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 OR52N5Q8NH56 324 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 JADE3Q92613 823 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 HOXB13Q92826 284 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CHMP6Q96FZ7 201 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 MRGPRX4Q96LA9 322 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 MS4A4EQ96PG1 132 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 TRMOQ9BU70 441 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 C12orf65Q9H3J6 166 aaKnown RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CXorf36Q9H7Y0 433 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 EMC3Q9P0I2 261 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 POLR3HQ9Y535 204 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-212ENST00000550880 ATP23Q9Y6H3 246 aa9.77□□□□□ -0.85
PFDN5-212ENST00000550880 CADP27708 2225 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 SPRY1O43609 319 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-212ENST00000550880 CYTIPO60759 359 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 RAD51DO75771 328 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 TGFAP01135 160 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 ATP5F1P24539 256 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-212ENST00000550880 APOBEC3AP31941 199 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-212ENST00000550880 MAP3K8P41279 467 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 POU6F2P78424 691 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-212ENST00000550880 ZNF117Q03924 483 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 CD226Q15762 336 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 IQCCQ4KMZ1 466 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 UBAP2Q5T6F2 1119 aaKnown RBP9.76□□□□□ -0.85
PFDN5-212ENST00000550880 FAM219BQ5XKK7 198 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 FBXW9Q5XUX1 488 aa9.76□□□□□ -0.85
PFDN5-212ENST00000550880 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms