RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CPA3P15088 417 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SDC1P18827 310 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 AGTR1P30556 359 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CRHR1P34998 444 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 EIF1P41567 113 aaKnown RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 PRKAG1P54619 331 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 MANFP55145 182 aaKnown RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 SUMO3P55854 103 aaPredicted RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 SLC18A2Q05940 514 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 MLC1Q15049 377 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 RNPS1Q15287 305 aaKnown RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 DUSP5Q16690 384 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 RFTN2Q52LD8 501 aaPredicted RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 ZNF385BQ569K4 471 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 EXOSC6Q5RKV6 272 aaKnown RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 PDSS1Q5T2R2 415 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CPTPQ5TA50 214 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 LIPMQ5VYY2 423 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 HBMQ6B0K9 141 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CLEC6AQ6EIG7 209 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 PPP4R4Q6NUP7 873 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 ADAM5Q6NVV9 412 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 Q6ZSR9 355 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SZRD1Q7Z422 152 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 GALNT10Q86SR1 603 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TRABD2AQ86V40 505 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 GATSQ8NAP1 163 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SLC16A11Q8NCK7 471 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 NUP43Q8NFH3 380 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 STEAP2Q8NFT2 490 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 RNF128Q8TEB7 428 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SLC9A6Q92581 669 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CPNE4Q96A23 557 aaPredicted RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 CIDECQ96AQ7 238 aaPredicted RBP6.8□□□□□ -1.32
NEK3-201ENST00000550331 PLPPR2Q96GM1 343 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 KLHL15Q96M94 604 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TSSK3Q96PN8 268 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 STACQ99469 402 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TRMOQ9BU70 441 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 HDHD5Q9BXW7 423 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 PPCSQ9HAB8 311 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 DUSP22Q9NRW4 184 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 GIN1Q9NXP7 522 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 MID2Q9UJV3 735 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CLEC4AQ9UMR7 237 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TMED5Q9Y3A6 229 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SNX8Q9Y5X2 465 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 PTGDR2Q9Y5Y4 395 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 A0A0J9YW62 118 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 GJE1A6NN92 205 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 AZIN1O14977 448 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 SOX30O94993 753 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 CHEK2O96017 543 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 FAM153BP0C7A2 387 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 RPL3P39023 403 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 ASMTP46597 345 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 PRIM2P49643 509 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 RPL38P63173 70 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 POU6F2P78424 691 aaPredicted RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 ZNF844Q08AG5 666 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 CD226Q15762 336 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 ETFDHQ16134 617 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 ZNF239Q16600 458 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 FAM153CQ494X1 144 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 ANKRD26P1Q6NSI1 321 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 HMBOX1Q6NT76 420 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 LRIG3Q6UXM1 1119 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 TFAP2EQ6VUC0 442 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 R3HCC1LQ7Z5L2 792 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 ZAR1Q86SH2 424 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 TDRPQ86YL5 185 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 LILRA2Q8N149 483 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 GABRG1Q8N1C3 465 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 COX18Q8N8Q8 333 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 EIF1ADQ8N9N8 165 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 ZNF527Q8NB42 609 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 OR2T11Q8NH01 316 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 B4GALNT2Q8NHY0 566 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 OSTF1Q92882 214 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 FAM120BQ96EK7 910 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 C16orf58Q96GQ5 468 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 SH3YL1Q96HL8 342 aaPredicted RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 REXO5Q96IC2 774 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 NPAS1Q99742 590 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 TACO1Q9BSH4 297 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 BTBD2Q9BX70 525 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 HOXD1Q9GZZ0 328 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 PIGUQ9H490 435 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 TMEM185BQ9H7F4 350 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 NGBQ9NPG2 151 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 TIGARQ9NQ88 270 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 ZCCHC3Q9NUD5 404 aaKnown RBP6.79□□□□□ -1.32
NEK3-201ENST00000550331 SH3BP4Q9P0V3 963 aa6.79□□□□□ -1.32
NEK3-201ENST00000550331 KLHL13Q9P2N7 655 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms