RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SSX8Q7RTT4 187 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 C6orf120Q7Z4R8 191 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZAR1Q86SH2 424 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 P3H2Q8IVL5 708 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 KRTCAP2Q8N6L1 136 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR8J2Q8NGG1 315 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR5W2Q8NH69 310 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 POC1BQ8TC44 478 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ARSGQ96EG1 525 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 PIK3IP1Q96FE7 263 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 SDF2Q99470 211 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 SERINC1Q9NRX5 453 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 C6orf203Q9P0P8 240 aaPredicted RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 GIMAP2Q9UG22 337 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 MED12LQ86YW9 2145 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 PRSS51A0A1B0GVH4 220 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 NPIPB9F8W1W9 429 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 STX11O75558 287 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 PRKD3O94806 890 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ARRB2P32121 409 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC6A8P48029 635 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 CLNS1AP54105 237 aaKnown RBP9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 HBA1P69905 142 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 TXNL4AP83876 142 aaKnown RBP9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF844Q08AG5 666 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 LRRC74AQ0VAA2 488 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 SELENBP1Q13228 472 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 CHI3L2Q15782 390 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF141Q15928 474 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ACKR1Q16570 336 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 EXOC3L2Q2M3D2 409 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ARHGAP11BQ3KRB8 267 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMEM176BQ3YBM2 270 aaPredicted RBP9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC25A53Q5H9E4 307 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 ATAD3BQ5T9A4 648 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 BIVMQ86UB2 503 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 STEAP2Q8NFT2 490 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 FBXO27Q8NI29 283 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 MIPOL1Q8TD10 442 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 GPR119Q8TDV5 335 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMEM234Q8WY98 164 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 TESCQ96BS2 214 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 OTUB1Q96FW1 271 aaPredicted RBP9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR7D2Q96RA2 312 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 DPY30Q9C005 99 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 LAT2Q9GZY6 243 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 AKTIPQ9H8T0 292 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 NGBQ9NPG2 151 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 DLL4Q9NR61 685 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 POLE3Q9NRF9 147 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 CARD8Q9Y2G2 431 aa9.73□□□□□ -0.85
VTI1BP3-201ENST00000550220 KIAA1549Q9HCM3 1950 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 WDR91A4D1P6 747 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SERINC4A6NH21 518 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ETV2O00321 342 aaPredicted RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 DHRS4L1P0CG22 281 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 UBL4AP11441 157 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 CREB1P16220 341 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 PRKCAP17252 672 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 LBPP18428 481 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 UQCRC2P22695 453 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC7A1P30825 629 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 CCKARP32238 428 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SFTPDP35247 375 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SOAT1P35610 550 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC1A6P48664 564 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ANXA11P50995 505 aaKnown RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 RAC3P60763 192 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 FOXF1Q12946 379 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 STX3Q13277 289 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 P2RY6Q15077 328 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 PDCD2Q16342 344 aaPredicted RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF239Q16600 458 aaKnown RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 AP1ARQ63HQ0 302 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 CBLN3Q6UW01 205 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 STAC2Q6ZMT1 411 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 EIF3MQ7L2H7 374 aaKnown RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 C16orf62Q7Z3J2 963 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 CXorf67Q86X51 503 aaPredicted RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF614Q8N883 585 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF781Q8N8C0 355 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 RNF128Q8TEB7 428 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ST8SIA1Q92185 356 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 C18orf12Q96KH6 178 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 CCL19Q99731 98 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 PARD6BQ9BYG5 372 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMEM185BQ9H7F4 350 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL9Q9P2J3 617 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL13Q9P2N7 655 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 HAO1Q9UJM8 370 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 PRDM4Q9UKN5 801 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC35A3Q9Y2D2 325 aa9.72□□□□□ -0.85
VTI1BP3-201ENST00000550220 RNF103-CHMP3A0A140T963 221 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 A0A1W2PPR1 153 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ANKRD28O15084 1053 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ITM2AO43736 263 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 DNAJA2O60884 412 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms