RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 SLC25A18Q9H1K4 315 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 OCEL1Q9H607 264 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 C19orf25Q9UFG5 118 aaPredicted RBP15.19■□□□□ 0.02
CUX1-213ENST00000549414 FCMRO60667 390 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 S1PR1P21453 382 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 ILKQ13418 452 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 SQSTM1Q13501 440 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 HYAL4Q2M3T9 481 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 LYSMD4Q5XG99 296 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 IL20RBQ6UXL0 311 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 OR5W2Q8NH69 310 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 RSC1A1Q92681 617 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 KIR3DX1Q9H7L2 352 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 A4GALTQ9NPC4 353 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 C1GALT1Q9NS00 363 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 SIT1Q9Y3P8 196 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 PRKYO43930 277 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 SLC19A2O60779 497 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 DRD5P21918 477 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 VAMP1P23763 118 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 MAPK3P27361 379 aaPredicted RBP15.19■□□□□ 0.02
CUX1-213ENST00000549414 SERTAD2Q14140 314 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 TMEM69Q5SWH9 247 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 PGBD2Q6P3X8 592 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 KCTD18Q6PI47 426 aaPredicted RBP15.19■□□□□ 0.02
CUX1-213ENST00000549414 MS4A15Q8N5U1 240 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 PARP16Q8N5Y8 322 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 SLC6A18Q96N87 628 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 LPAR4Q99677 370 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 ICKQ9UPZ9 632 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 IGLV3-16A0A075B6K0 115 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 CLDN24A6NM45 220 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 OR3A3P47888 321 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 OR3A2P47893 321 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 ELOAQ14241 798 aaKnown RBP15.19■□□□□ 0.02
CUX1-213ENST00000549414 NKAIN4Q8IVV8 208 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 DIO2Q92813 273 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 C4orf36Q96KX1 117 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 BTBD2Q9BX70 525 aa15.19■□□□□ 0.02
CUX1-213ENST00000549414 SOCS6O14544 535 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 F13BP05160 661 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 DCNP07585 359 aaKnown RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 HCKP08631 526 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 CCNOP22674 350 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 OPRD1P41143 372 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 GP2P55259 537 aaKnown RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 GBX1Q14549 363 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 SFRP4Q6FHJ7 346 aaPredicted RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 MFSD12Q6NUT3 480 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 OR2T4Q8NH00 348 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 EP400Q96L91 3159 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 GALK2Q01415 458 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 SNTB2Q13425 540 aaKnown RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 DUSP5Q16690 384 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 GDPGP1Q6ZNW5 385 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 P4HA3Q7Z4N8 544 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 SERPINA12Q8IW75 414 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 ANKRD53Q8N9V6 530 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 OR2A1Q8NGT9 310 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 PAQR5Q9NXK6 330 aaPredicted RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 MYEF2Q9P2K5 600 aaKnown RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 A0A1W2PQ09 198 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 ITGA5P08648 1049 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 ACP2P11117 423 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 STOMP27105 288 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 YPEL5P62699 121 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 ACTA2P62736 377 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 ACTG2P63267 376 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 SGCAQ16586 387 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 NTRK2Q16620 822 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 AGBL4Q5VU57 503 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 NKAIN2Q5VXU1 208 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 KIAA0895LQ68EN5 471 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 SLC46A3Q7Z3Q1 461 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 TNFRSF13CQ96RJ3 184 aa15.18■□□□□ 0.02
CUX1-213ENST00000549414 WDR77Q9BQA1 342 aaPredicted RBP15.18■□□□□ 0.02
CUX1-213ENST00000549414 PIP5K1CO60331 668 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 GABARAPO95166 117 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 BSGP35613 385 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 PDE7AQ13946 482 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 QSOX2Q6ZRP7 698 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 PRICKLE2Q7Z3G6 844 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 PAQR7Q86WK9 346 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 CEP76Q8TAP6 659 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 TRMT10AQ8TBZ6 339 aaKnown RBP15.17■□□□□ 0.02
CUX1-213ENST00000549414 TMEM41AQ96HV5 264 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 OR1F2PQ96R84 312 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 NDRG4Q9ULP0 352 aaKnown RBP15.17■□□□□ 0.02
CUX1-213ENST00000549414 FXYD6-FXYD2A0A087WZ82 144 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 HPGDSO60760 199 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 SYPP08247 313 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 H2BFMP0C1H6 154 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 FXYD6Q9H0Q3 95 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 SIDT1Q9NXL6 827 aaKnown RBP15.17■□□□□ 0.02
CUX1-213ENST00000549414 OBP2AQ9NY56 170 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 CBLCQ9ULV8 474 aa15.17■□□□□ 0.02
CUX1-213ENST00000549414 CEACAM5P06731 702 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms