RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MINDY4Q4G0A6 757 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 BMP8AQ7Z5Y6 402 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 CSNK1A1LQ8N752 337 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OR8K3Q8NH51 312 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 RSC1A1Q92681 617 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 NKX3-1Q99801 234 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 TIMM29Q9BSF4 260 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 SOHLH2Q9NX45 425 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ADAM29Q9UKF5 820 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CASC3O15234 703 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 SURF4O15260 269 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 STX11O75558 287 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 PIPP12273 146 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 OR13H1Q8NG92 308 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 ITPKCQ96DU7 683 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 ZSCAN32Q9NX65 697 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CALML5Q9NZT1 146 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 DAPP1Q9UN19 280 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CDC14CA4D256 554 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 NUDT14O95848 222 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CD3GP09693 182 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 HPGDP15428 266 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CPEP16870 476 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 HTR2AP28223 471 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 LSSP48449 732 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 TNFRSF17Q02223 184 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 DGAT2L6Q6ZPD8 337 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 CCDC32Q9BV29 185 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 TMEM27Q9HBJ8 222 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 TRPV5Q9NQA5 729 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 OR6C2Q9NZP2 312 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC17A4Q9Y2C5 497 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 PLXNA2O75051 1894 aa12.69□□□□□ -0.38
PRPF40B-209ENST00000548825 RIIAD1A6NNX1 92 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 RAD1O60671 282 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SDC3O75056 442 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ERGP11308 486 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 MAGEA8P43361 318 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 CLDN12P56749 244 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ABATP80404 500 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 PRR22Q8IZ63 422 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF681Q96N22 645 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 GALNT9Q9HCQ5 603 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 TAS2R7Q9NYW3 318 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 TESQ9UGI8 421 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 CES1P1Q9UKY3 287 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SYPP08247 313 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 MAP2K3P46734 347 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 RPS15AP62244 130 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 CDC20Q12834 499 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 C3orf38Q5JPI3 329 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 C17orf47Q8NEP4 570 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 EFHD2Q96C19 240 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ZFYVE21Q9BQ24 234 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 PPIL3Q9H2H8 161 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 B3GAT2Q9NPZ5 323 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 RPRD1BQ9NQG5 326 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 RWDD3Q9Y3V2 267 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ZIC1Q15915 447 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ALG10BQ5I7T1 473 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 OR6F1Q8NGZ6 308 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SNX33Q8WV41 574 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 GAL3ST4Q96RP7 486 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ARHGAP9Q9BRR9 750 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 BCL2L10Q9HD36 194 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 ACAD8Q9UKU7 415 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 CBLCQ9ULV8 474 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 CDH10Q9Y6N8 788 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
PRPF40B-209ENST00000548825 TRAPPC13A5PLN9 417 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 URADA6NGE7 173 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms