RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CLDN4O14493 209 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 COQ9O75208 318 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 OXSR1O95747 527 aaPredicted RBP18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 MST1P26927 711 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 PRKAR1BP31321 381 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 GCGRP47871 477 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 HSD17B7P56937 341 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 FAAH2Q6GMR7 532 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 SLC16A11Q8NCK7 471 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 PELOQ9BRX2 385 aaKnown RBP18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 MTHFD2LQ9H903 347 aaPredicted RBP18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 WDR54Q9H977 334 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 EQTNQ9NQ60 294 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 NDRG4Q9ULP0 352 aaKnown RBP18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 IFT52Q9Y366 437 aa18.33■□□□□ 0.53
CTDSP2-204ENST00000548823 BCKDKO14874 412 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC19A2O60779 497 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 MITFO75030 526 aaPredicted RBP18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 ALOX5P09917 674 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 ACP2P11117 423 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 ISL1P61371 349 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 LAPTM4AQ15012 233 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 EXOC3L2Q2M3D2 409 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 TRMT12Q53H54 448 aaKnown RBP18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 SAP130Q9H0E3 1048 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 ANKRA2Q9H9E1 313 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 POLE3Q9NRF9 147 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 PRTFDC1Q9NRG1 225 aa18.32■□□□□ 0.52
CTDSP2-204ENST00000548823 J3KTA2 159 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 FFAR1O14842 300 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 SEC24DO94855 1032 aaPredicted RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 CCNB2O95067 398 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 ALDH3B2P48448 385 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 HLCSP50747 726 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 TPD52P55327 224 aaPredicted RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 HPCAP84074 193 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 ID2Q02363 134 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 CHRNEQ04844 493 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 NPRL3Q12980 569 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 C3AR1Q16581 482 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 DUSP5Q16690 384 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 CYP27C1Q4G0S4 372 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 MEX3BQ6ZN04 569 aaKnown RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 OVCH1Q7RTY7 1134 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 TSPYL5Q86VY4 417 aaPredicted RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 TGIF2LYQ8IUE0 185 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 PARP8Q8N3A8 854 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 LINC00471Q8N535 108 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 OR11G2Q8NGC1 345 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 PHF10Q8WUB8 498 aaKnown RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 HAS2Q92819 552 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF566Q969W8 418 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 FEVQ99581 238 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 ARHGDIGQ99819 225 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 APOL4Q9BPW4 351 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 EVA1AQ9H8M9 152 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 CXorf21Q9HAI6 301 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 CDC14AQ9UNH5 594 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 PRRC2AP48634 2157 aaKnown RBP18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 ACANP16112 2415 aa18.31■□□□□ 0.52
CTDSP2-204ENST00000548823 MYOCOSA0A1B0GUC4 107 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 TTC36A6NLP5 189 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 H1F0P07305 194 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 THBS1P07996 1170 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CBLP22681 906 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 YAP1P46937 504 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CLK3P49761 638 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 NUP107P57740 925 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 GABARAPL2P60520 117 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CXCR4P61073 352 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SERTAD2Q14140 314 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF311Q5JNZ3 666 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 C6orf141Q5SZD1 244 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 RNF220Q5VTB9 566 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 FRRS1Q6ZNA5 592 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 VWA5B2Q8N398 1253 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC5A8Q8N695 610 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 OR4D11Q8NGI4 311 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CDS1Q92903 461 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 MMABQ96EY8 250 aaPredicted RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 OTUB1Q96FW1 271 aaPredicted RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 PEX11GQ96HA9 241 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 HRASLS5Q96KN8 279 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ALPK1Q96QP1 1244 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SDF2Q99470 211 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SPSB2Q99619 263 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 FUZQ9BT04 418 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 RIBC2Q9H4K1 309 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF556Q9HAH1 456 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 NMNAT1Q9HAN9 279 aaPredicted RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 PAPOLBQ9NRJ5 636 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CUTCQ9NTM9 273 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 HCN3Q9P1Z3 774 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 BLOC1S6Q9UL45 172 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 TMCC3Q9ULS5 477 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 MMACHCQ9Y4U1 282 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 A0A1W2PRQ8 180 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 FAAHO00519 579 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 OR10H2O60403 315 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 NKX2-2O95096 273 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms