RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR5AK3PQ8NH89 298 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ADAMTS15Q8TE58 950 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 AENQ8WTP8 325 aaKnown RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ROBO4Q8WZ75 1007 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 OSTF1Q92882 214 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ZNF524Q96C55 264 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 BHLHE41Q9C0J9 482 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ACTR6Q9GZN1 396 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 HOXD1Q9GZZ0 328 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 SERHL2Q9H4I8 314 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 C12orf49Q9H741 205 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 FAF1Q9UNN5 650 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 CARD8Q9Y2G2 431 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 USF3Q68DE3 2245 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 NTN1O95631 604 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 G6PDP11413 515 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 PRKCAP17252 672 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 PSMB1P20618 241 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 PRPS1L1P21108 318 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 ADH6P28332 368 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 CARD18P57730 90 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 RPS26P62854 115 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 HBA1P69905 142 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 LSM12Q3MHD2 195 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 BEND4Q6ZU67 534 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 STK32CQ86UX6 486 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 OR5D16Q8NGK9 328 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 FBXO27Q8NI29 283 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 CPNE4Q96A23 557 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 MOAP1Q96BY2 351 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 TUBGCP3Q96CW5 907 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 PERPQ96FX8 193 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 Q96MF0 132 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 OR7D2Q96RA2 312 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 DUSP26Q9BV47 211 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 OR10A4Q9H209 315 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF395Q9H8N7 513 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 KLHL13Q9P2N7 655 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 GPC6Q9Y625 555 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 ZANQ9Y493 2812 aa15.51■□□□□ 0.07
CHMP1A-205ENST00000548650 H3BNH8 94 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ETV2O00321 342 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF195O14628 629 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 NUDT14O95848 222 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 HEXAP06865 529 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 SOAT1P35610 550 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ATP12AP54707 1039 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 PRSS57Q6UWY2 283 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 CLEC9AQ6UXN8 241 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 TFAP2EQ6VUC0 442 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF704Q6ZNC4 412 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 YTHDF3Q7Z739 585 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 CIARTQ8N365 385 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF614Q8N883 585 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 GPR119Q8TDV5 335 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ZFP90Q8TF47 636 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 PRPF18Q99633 342 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 TMEM204Q9BSN7 226 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 GSX2Q9BZM3 304 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ROPN1BQ9BZX4 212 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ROPN1Q9HAT0 212 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 FANCFQ9NPI8 374 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 ASIC5Q9NY37 505 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 GPR52Q9Y2T5 361 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 DTNAQ9Y4J8 743 aa15.5■□□□□ 0.07
CHMP1A-205ENST00000548650 CENPVL1A0A0U1RR11 272 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 GJE1A6NN92 205 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 H7C1Q1 480 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 GCM2O75603 506 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 SOX30O94993 753 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 PLAUP00749 431 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 PABPC4LP0CB38 370 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 UBL4AP11441 157 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 NR1H2P55055 460 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 SELENBP1Q13228 472 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 RNPS1Q15287 305 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 SLC25A53Q5H9E4 307 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 EMBQ6PCB8 327 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 NUFIP2Q7Z417 695 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 WFDC8Q8IUA0 241 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 CLECL1Q8IZS7 167 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 GABRG1Q8N1C3 465 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 ARSGQ96EG1 525 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 PLPPR2Q96GM1 343 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 PKNOX2Q96KN3 472 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 MRGPRX4Q96LA9 322 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 SDF2Q99470 211 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 NMUR2Q9GZQ4 415 aa15.49■□□□□ 0.07
CHMP1A-205ENST00000548650 CSPG4Q6UVK1 2322 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TRIM64A6NGJ6 449 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TRIM64BA6NI03 449 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 ESPNB1AK53 854 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 CFLARO15519 480 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 PTH2RP49190 550 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 CLDN8P56748 225 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 EMX2Q04743 252 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 MAD2L1Q13257 205 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 SKP2Q13309 424 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 PDCD2Q16342 344 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TMEM176BQ3YBM2 270 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms