RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 DUSP8Q13202 625 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 DHRS4L2Q6PKH6 230 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 RPTNQ6XPR3 784 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SPATC1Q76KD6 591 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SDR9C7Q8NEX9 313 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 CNDP2Q96KP4 475 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SARGQ9BW04 601 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 MND1Q9BWT6 205 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 DSPPQ9NZW4 1301 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SH3D21A4FU49 640 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 C4orf47A7E2U8 309 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 GTPBP1O00178 669 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 RAB36O95755 333 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 DBIP07108 87 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 CD27P26842 260 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 CD1CP29017 333 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 PRKAR1BP31321 381 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ACVR1BP36896 505 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SLC3A1Q07837 685 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 COX10Q12887 443 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 C12orf73Q69YU5 71 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ARL9Q6T311 187 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SLC36A4Q6YBV0 504 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 GPR135Q8IZ08 494 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 HLA-CQ95604 372 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SIGLEC11Q96RL6 698 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ISG20L2Q9H9L3 353 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 ACAD8Q9UKU7 415 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 MED31Q9Y3C7 131 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 UNC119BA6NIH7 251 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 METTL12A8MUP2 240 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 HOXC4P09017 264 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 NID1P14543 1247 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 GSTM3P21266 225 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 RAB38P57729 211 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF367Q7RTV3 350 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 OR6K6Q8NGW6 343 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 TMEM163Q8TC26 289 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 ZMYND19Q96E35 227 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CRELD1Q96HD1 420 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 NELL2Q99435 816 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 PCNX3Q9H6A9 2034 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CDHR4A6H8M9 788 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CASKO14936 926 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CSF2P04141 144 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 BMP8BP34820 402 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CAPZBP47756 277 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CENPAP49450 140 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 COPZ1P61923 177 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 NSDHLQ15738 373 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 BMP8AQ7Z5Y6 402 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 LAX1Q8IWV1 398 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 SDR16C5Q8N3Y7 309 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 ATOH1Q92858 354 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 SENP5Q96HI0 755 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 ARHGDIGQ99819 225 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 POLDIP3Q9BY77 421 aaKnown RBP11.76□□□□□ -0.53
SCAF11-209ENST00000547018 TNFRSF10DQ9UBN6 386 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 RNF215Q9Y6U7 377 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 CEP250Q9BV73 2442 aa11.76□□□□□ -0.53
SCAF11-209ENST00000547018 J3QLW9 94 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF217O75362 1048 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF19P17023 458 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 CCR5P51681 352 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 HNRNPKP61978 463 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 PGGHGQ32M88 737 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 FAM27D1Q5T7N8 215 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 MBOAT2Q6ZWT7 520 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 OR52E2Q8NGJ4 325 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SPRYD4Q8WW59 207 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ERMAPQ96PL5 475 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 OR10A5Q9H207 317 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 Q9N2J8 555 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SLC2A4RGQ9NR83 387 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 MKL2Q9ULH7 1088 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 PRODHO43272 600 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SSX4O60224 188 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 PDGFBP01127 241 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 CFIP05156 583 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ACVR2AP27037 513 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 SNRPGP62308 76 aaKnown RBP11.75□□□□□ -0.53
SCAF11-209ENST00000547018 CRMP1Q14194 572 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 CBLN3Q6UW01 205 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF620Q6ZNG0 422 aa11.75□□□□□ -0.53
SCAF11-209ENST00000547018 OSTF1Q92882 214 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms