RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 WDR75Q8IWA0 830 aaKnown RBP8.22□□□□□ -1.09
SSH1-205ENST00000546812 KIRREL3Q8IZU9 778 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 GABRG1Q8N1C3 465 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
SSH1-205ENST00000546812 OR2M3Q8NG83 312 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 OR52R1Q8NGF1 315 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 TUBGCP3Q96CW5 907 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
SSH1-205ENST00000546812 C1orf50Q9BV19 199 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 C1orf109Q9NX04 203 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 MAT2BQ9NZL9 334 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 PPP4R1LQ9P1A2 415 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 ADAM29Q9UKF5 820 aa8.22□□□□□ -1.09
SSH1-205ENST00000546812 MALRD1Q5VYJ5 2156 aa8.21□□□□□ -1.09
SSH1-205ENST00000546812 GOLGA8QA0A0J9YX86 632 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 GOLGA8OA6NCC3 632 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 SHISA9B4DS77 424 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 GOLGA8NF8WBI6 632 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 SDHDO14521 159 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 HDAC3O15379 428 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 KIAA0513O60268 411 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 EDF1O60869 148 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 PEX11AO75192 247 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 SEC22BO75396 215 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 IL3P08700 152 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 ITGA2P17301 1181 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 IL32P24001 234 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 TTKP33981 857 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 KRT20P35900 424 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 EIF1AXP47813 144 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 PNLIPRP2P54317 469 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PSPHP78330 225 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 TSC22D1Q15714 1073 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 GLYR1Q49A26 553 aaPredicted RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 ATP6AP1LQ52LC2 224 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PDLIM3Q53GG5 364 aaPredicted RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 TRMT12Q53H54 448 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 C11orf71Q6IPW1 123 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 MFSD12Q6NUT3 480 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 NOXRED1Q6NXP6 359 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 GGNQ86UU5 652 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 ZNF619Q8N2I2 560 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 HTRA1Q92743 480 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 MSI2Q96DH6 328 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 THOC1Q96FV9 657 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 FCRL1Q96LA6 429 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PPP3R2Q96LZ3 170 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 BTBD9Q96Q07 612 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 WDR55Q9H6Y2 383 aaPredicted RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 C12orf49Q9H741 205 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PTGES2Q9H7Z7 377 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 MEAF6Q9HAF1 191 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PFDN4Q9NQP4 134 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 FBXO34Q9NWN3 711 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 PAQR5Q9NXK6 330 aaPredicted RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 MED11Q9P086 117 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 MCM8Q9UJA3 840 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 CES1P1Q9UKY3 287 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 MCTS1Q9ULC4 181 aaKnown RBP8.21□□□□□ -1.1
SSH1-205ENST00000546812 USH1CQ9Y6N9 552 aa8.21□□□□□ -1.1
SSH1-205ENST00000546812 TRPC5OSA6NMA1 111 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 NPIPB8E9PQR5 432 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 SLCO1B7G3V0H7 640 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 EIF1AYO14602 144 aaKnown RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 ZNF195O14628 629 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 POLR3GO15318 223 aaPredicted RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 SCO2O43819 266 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 VIMP08670 466 aaKnown RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 ANXA4P09525 319 aaPredicted RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 CSF3P09919 207 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 CT45A8P0DMV1 189 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 CT45A9P0DMV2 189 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 SDC1P18827 310 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 CSNK2A2P19784 350 aaPredicted RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 EPHA3P29320 983 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 IL12BP29460 328 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 AGTR1P30556 359 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 FEN1P39748 380 aaKnown RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 ALDH9A1P49189 494 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 COMPP49747 757 aaPredicted RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 CDH11P55287 796 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 CORO7P57737 925 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 MRPS22P82650 360 aaKnown RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 ZNF763Q0D2J5 394 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 TMEM44Q2T9K0 475 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 RFTN2Q52LD8 501 aaPredicted RBP8.2□□□□□ -1.1
SSH1-205ENST00000546812 CT45A2Q5DJT8 189 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 C6orf136Q5SQH8 315 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 SLC48A1Q6P1K1 146 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 GALNT18Q6P9A2 607 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 FNDC5Q8NAU1 212 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 OR10D3Q8NH80 312 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 CLHC1Q8NHS4 586 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 C16orf78Q8WTQ4 265 aa8.2□□□□□ -1.1
SSH1-205ENST00000546812 ZFAND2BQ8WV99 257 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms